Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical pr...    81   4e-16
U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical pr...    28   3.5  
L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein ( Caeno...    27   6.2  
Z81557-2|CAB04536.1|  354|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81528-3|CAB04289.2|  132|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr...    27   8.1  
L13200-5|AAZ32789.1|  148|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical
           protein ZK809.3 protein.
          Length = 210

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +3

Query: 102 MTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKP 281
           M++   +A ER R  G++ AER WRK+W+ DQ L A EPV V+   R+  NPIR  YR P
Sbjct: 41  MSLELHMADERVRAAGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQ-LNPIRTAYRLP 99

Query: 282 LDVLFAK-LTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKT 458
            D  +   L P  G       R  + KL +  V + + +YY+KY   DWT   G + +  
Sbjct: 100 WDKFYLHYLKPTFGVYYGTAIRVTAPKLLMAFVVVQTAYYYWKYEVKDWTHLRGLESMPQ 159

Query: 459 KPMV 470
           K ++
Sbjct: 160 KEVI 163


>U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical
           protein C14A11.5 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 198 VLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYRY 347
           V+ AH  V   +YW++ T P    Y +   +LF K  P + +    + RY
Sbjct: 373 VVKAHI-VRKLDYWKKSTQPQAAHYTEMYQLLFEKCGPSISDVIMNYMRY 421


>L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein (
           Caenorhabditis eleganstransposable element Tc4, complete
           cds. ).
          Length = 537

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -1

Query: 185 PLLTPSPFCISHTKTSFPFTGYATNYRHRFNTRCL-CHFFE**LHLVLEKK 36
           P LTP+ +CI H  T      Y T   H    RC  C  F    H V+ K+
Sbjct: 484 PFLTPAQYCIDHGDT---VICYHTGCNHLGFIRCARCKMFVCFNHFVVSKQ 531


>Z81557-2|CAB04536.1|  354|Caenorhabditis elegans Hypothetical
           protein F59A1.4 protein.
          Length = 354

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 285 DVLFAKLTPM-LGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYL 413
           + LF    P+ L +  A H+  I+     I +++L+ H++++YL
Sbjct: 70  EFLFFSTNPLHLHKTVAKHFNLINFACSGIIISLLAIHFFYRYL 113


>Z81528-3|CAB04289.2|  132|Caenorhabditis elegans Hypothetical
           protein F35E2.3 protein.
          Length = 132

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 174 RKQWLKDQVLAAHEPVHVEEYWRERTNPI 260
           R++W K          HVE YW+  + P+
Sbjct: 2   REEWDKTHQRPRQRSFHVENYWKSLSTPV 30


>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
            R08E3.1a protein.
          Length = 1512

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 48   NQV*LLFEKMAQTAGVKPMTI 110
            N + +L+EK+ QTAGV P  I
Sbjct: 1490 NVINILYEKLCQTAGVDPTAI 1510


>L13200-5|AAZ32789.1|  148|Caenorhabditis elegans Hypothetical
           protein ZK1236.5 protein.
          Length = 148

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 237 NILPRELARERLKLDLLTIAYAKPFLHQSY 148
           NIL   LARE++ ++LLT  Y+  +   +Y
Sbjct: 49  NILRERLAREQIVMNLLTRPYSTAYAELTY 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,098,799
Number of Sequences: 27780
Number of extensions: 287785
Number of successful extensions: 848
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)