Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311G04f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 58 4e-09
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 53 1e-07
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 4e-07
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 4e-07
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 51 5e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 50 1e-06
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 48 6e-06
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 38 0.007
SB_32739| Best HMM Match : PA (HMM E-Value=0.19) 31 0.44
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_29935| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-06) 28 4.1
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 28 4.1
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026) 27 9.4
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 DKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAA 447
D DKFQ+ LDV+ F PEEI+ K +G I V + S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEEG-FDSKEFRRCYNLPEGVD 60
Query: 448 PETVESRLSSDGVLTITAPRKVP 516
++ +R++ DG+L + A +K P
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSP 83
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = +1
Query: 271 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 450
D KF + LDV F PEE+ VK G+ + + +RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVY-GHELSVRARQECEEHGFFTARQFNRHFVLPREVDM 154
Query: 451 ETVESRLSSDGVLTITAPRK 510
+T+ RL DGVL I A ++
Sbjct: 155 DTLVPRLGKDGVLYIEADKR 174
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 250 LGSSIKADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
L ++ + + DK ++ LDV+++ PEEIS+K G I + Y + +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSEGEHG-YETSEFHRSY 87
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRKVP 516
LP+G TV SR++ DG+L I A + P
Sbjct: 88 NLPDGVDVSTVSSRITGDGLLHIEALKAEP 117
Score = 27.5 bits (58), Expect(2) = 0.077
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 229 LAAASRDLGSSIKADKDKFQVNLDVQHFSPE 321
+ A++ G K D +F V LDV FSP+
Sbjct: 125 VGASTGSAGDIAKIDDKRFTVTLDVSSFSPD 155
Score = 25.4 bits (53), Expect(2) = 0.077
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 418 RRYALPEGAAPETVESRLSSDGVLTITAPR 507
R + LP+ +++ SRL DG L I A R
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKR 190
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFALPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRKVP 516
V++R+S+ G L I A + +P
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALP 84
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 247 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
D G DKF + +DV F P+ I V+ ++V Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 145
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRK 510
LP +++ +RL +G L A ++
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFALPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRKVP 516
V++R+S+ G L I A + +P
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALP 84
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 247 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
D G DKF + +DV F P+ I V+ ++V Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 145
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRK 510
LP +++ +RL +G L A ++
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A K+ ++ LDV+ + PEEIS K +G + V + ++F R + LPEG
Sbjct: 2 AKKNTLEIAKLDVKEYRPEEISFKVENGVVKVQGRHVNEGEFGFEL-KEFRRTFTLPEGI 60
Query: 445 APETVESRLSSDGVLTITAPRKVP 516
PE V SR+S+ G L I A + +P
Sbjct: 61 DPENVTSRISNHGHLHIEARKALP 84
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +1
Query: 265 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
KA +DKF + +DV F PE I V+ ++V Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLV-NANHEVEHEGHYHAMHFNRQFVLPREV 150
Query: 445 APETVESRLSSDGVLTITAPRKV 513
+++ +RL +G L A + V
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSV 173
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRKVP 516
V++R+S+ G L I A + +P
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALP 84
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 277 DKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 453
D+ ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGVEAS 297
Query: 454 TVESRLSSDGVLTITAPRKVP 516
V++R+S+ G L I A + +P
Sbjct: 298 NVKTRISNHGQLHIEAMKALP 318
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 247 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
D G DKF + +DV F P+ I V+ ++V Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 145
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRK 510
LP +++ +RL +G L A ++
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKR 173
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 247 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
D G DKF + +DV F P+ I V+ ++V Y + F R++
Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 379
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRK 510
LP +++ +RL +G L A ++
Sbjct: 380 VLPREVDMDSLTTRLDKEGKLHFEAKKR 407
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRKVP 516
V++R+S+ G L I A + +P
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALP 84
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 247 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
D G DKF + +DV F P+ I V+ ++V Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 145
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRK 510
LP +++ +RL +G L A ++
Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 271 DKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAA 447
+++K ++ LDV+ + PEEIS K +G + V + ++F R + LPEG
Sbjct: 4 NENKLEIAKLDVREYRPEEISFKVENGVVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGVE 62
Query: 448 PETVESRLSSDGVLTITAPRKVPD 519
V++R+S+ G L I A + +P+
Sbjct: 63 ASNVKTRISNHGQLHIEAMKALPE 86
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +1
Query: 253 GSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYAL 432
G+ ++ DKF + +DV+ F PE I V+ ++V Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFIL 147
Query: 433 PEGAAPETVESRLSSDGVLTITAPRK 510
P +++ +RL +G L A ++
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 238 ASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFV 417
A+++ S+ D KF + LDV F PEE+ VK G+ + + +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVY-GHELSVRARQECEEHGFFTARQFN 71
Query: 418 RRYALPE 438
R + LP+
Sbjct: 72 RHFVLPQ 78
>SB_32739| Best HMM Match : PA (HMM E-Value=0.19)
Length = 319
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 185 PVQCSPKTTSDRGDNSRLHLVTSAP---A*RPTRTSSKSIWTCSTS 313
P+ P++ R D R L S P A T T S S+WTCS S
Sbjct: 273 PLDLKPRSNVMRVDEGRYELKLSCPFHCAFSHTLTDSHSLWTCSNS 318
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 243 RCSRELSPRSEVVFGEHWTGDGSQHVVRG*RQP 145
R SR SP + FG TGDG QH+V+ +P
Sbjct: 100 RASRTPSPSDSIDFGAVETGDGLQHLVKERARP 132
>SB_29935| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-06)
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -3
Query: 267 LYAGAEVTRCSRELSPRSEVVFGE----HWTGDGSQH 169
LY+ V + +RE+ R ++ F E HWTG G H
Sbjct: 83 LYSSGNVNQAAREMGKR-DIDFMEISETHWTGQGKMH 118
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 456 CGIAAVIRRGSHHHRAEE 509
CG++ ++RRG +HH EE
Sbjct: 23 CGVSRILRRGYNHHLNEE 40
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 194 CSPKTTSDRGDNSRLHLVTSAP 259
C P T G NS +H+ T+AP
Sbjct: 1605 CVPNNTLGTGQNSSVHITTTAP 1626
>SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
Length = 1532
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 182 SPVQCSPKTTSDRGDNSRLHLVTSA-PA*RPTRTSS 286
SP C P+ +D G S TSA PA P RT S
Sbjct: 1188 SPAVCLPERHTDSGSTSAQPAGTSAEPAQEPARTPS 1223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,139,527
Number of Sequences: 59808
Number of extensions: 319902
Number of successful extensions: 887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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