Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   3.8  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   6.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 212 EPIASVVCSGRAAISTLLSGTQRPINYWRTNRS 310
           +PI S  C GR A    +SG++     W+  RS
Sbjct: 58  KPIPSFACIGRCASYIQVSGSK----IWQMERS 86


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 377 QYVVPDKSMLDDI 339
           +YV+PD   +DDI
Sbjct: 19  EYVIPDNIDIDDI 31


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 238 REGCDLDPVIGDTEADKLLEDKPE 309
           REG  L+P+   TEAD      P+
Sbjct: 386 REGKQLNPLNKGTEADSSFVTLPQ 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,030
Number of Sequences: 336
Number of extensions: 2861
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)