Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311G01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0500 + 3744062-3744847 34 0.060
07_03_0761 - 21314806-21315144,21315267-21315417,21315509-213157... 30 0.98
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 30 1.3
11_04_0088 + 13377605-13378237 30 1.3
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 30 1.3
01_06_0398 - 29028530-29028760 30 1.3
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 29 1.7
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 29 3.0
06_01_0168 - 1340119-1340232,1340615-1340815 29 3.0
05_01_0077 + 520761-520929,521164-521435,521530-521566,521743-52... 29 3.0
03_01_0623 - 4580908-4582107 29 3.0
11_04_0128 + 13752727-13752809,13752922-13753129,13753238-137533... 28 4.0
05_07_0031 - 27183252-27183317,27183542-27184282 28 4.0
04_04_0429 - 25150266-25150916 28 4.0
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 28 4.0
02_03_0079 + 14914035-14914160,14917101-14917361 28 4.0
11_04_0125 + 13723966-13724011,13724282-13724430,13725100-137251... 28 5.2
08_02_1095 - 24278295-24278741,24279066-24279307,24279647-242797... 28 5.2
08_02_0839 + 21693348-21694853 28 5.2
07_03_0766 - 21354494-21354772,21355094-21355247,21355340-213555... 28 5.2
03_03_0249 + 15832086-15833261 28 5.2
02_05_0552 - 29911280-29912541,29912633-29912762 28 5.2
09_04_0436 - 17558603-17559265,17559322-17559384 27 6.9
07_03_0894 + 22362717-22363514 27 6.9
06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949... 27 6.9
02_03_0246 - 16807619-16808145,16808208-16808868 27 6.9
09_02_0195 + 5643549-5645090 27 9.1
05_05_0065 - 22069798-22069890,22070878-22071160,22071240-220713... 27 9.1
04_03_0047 + 10118929-10119276 27 9.1
02_04_0094 + 19664434-19665078 27 9.1
02_01_0314 + 2106976-2107658,2107792-2107931,2108367-2108636,210... 27 9.1
01_06_1353 + 36533795-36533827,36533904-36533993,36535595-365356... 27 9.1
>07_01_0500 + 3744062-3744847
Length = 261
Score = 34.3 bits (75), Expect = 0.060
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 337 AMSSSIDLSGTTYCVLSGASQGIGRAIAVEVAKL 438
A ++++ LSG +++GAS+GIGRAIA+ +A L
Sbjct: 10 AQAAALPLSGRV-AIVTGASRGIGRAIAIHLASL 42
>07_03_0761 -
21314806-21315144,21315267-21315417,21315509-21315746,
21315873-21316083,21316585-21316715,21317112-21317249,
21320183-21321071
Length = 698
Score = 30.3 bits (65), Expect = 0.98
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 389 APPRASGGPLPWRLRNFSVRN 451
APPRA PLPW+L N + N
Sbjct: 39 APPRAGAQPLPWQLCNATAGN 59
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +1
Query: 334 MAMSSSID----LSGTTYCVLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQLA 492
MA +SSI+ L+G T +++G S+GIGRAI E+A + + ARN+ +L+
Sbjct: 1 MATASSINKRFSLAGAT-ALVTGGSKGIGRAIVEELASF---GATVHTCARNQAELS 53
>11_04_0088 + 13377605-13378237
Length = 210
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +1
Query: 373 YCVLSGASQGIGRAIAVEVAK 435
+ V++GA+ GIGRA+A+E+A+
Sbjct: 43 WAVVTGATDGIGRAVALELAR 63
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 449 FGPRSF-ATSTAMARPMPWEAPDRTQYVVPDKSMLDDIAIFTHKA 318
F PR + A RP P E P +++ V D ++DD AI KA
Sbjct: 1061 FDPRRWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKA 1105
>01_06_0398 - 29028530-29028760
Length = 76
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 465 EQDNGFRTEKFRNLHGNGPPDALGGAGQDAVRGAG 361
E + G E R HG G DA GG G A+ G
Sbjct: 18 EAEGGGGAEAIRRSHGGGAMDAHGGGGAGAMEAEG 52
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAK 435
V++GAS+GIGRAIAV + K
Sbjct: 13 VVTGASRGIGRAIAVALGK 31
>07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 88 EDNFQPSTEKLADSPQYLALLERKLKAVRSK-NKVVENLSAYRADCI 225
ED + +++ S LALLE+K +S+ N +V+N R DC+
Sbjct: 1130 EDELEELWKEMDYSLTTLALLEQKQVMAQSRINMLVDNFDGLRLDCL 1176
>06_01_0168 - 1340119-1340232,1340615-1340815
Length = 104
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 177 EEQGGGKL--ISVQSRLHRSFAPGGL-RSRPCYRGHRGR*TIG 296
++ GGG+ ++V R RSFAPG RS +R RG IG
Sbjct: 23 DDDGGGEQRPVAVDHRRRRSFAPGAADRSMGDWRRRRGERGIG 65
>05_01_0077 +
520761-520929,521164-521435,521530-521566,521743-521840,
521979-522040,522324-522447,522688-522807
Length = 293
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 341 CRLASIYPAPRTASCPAPPRASGGPLP 421
C L + P PR A A+GGPLP
Sbjct: 19 CNLTASRPGPRRAGLAVVSAAAGGPLP 45
>03_01_0623 - 4580908-4582107
Length = 399
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 334 MAMSSSIDLSGTTYCVLSGASQGIGRAIAVEVAKL-LGPKSVILLLA 471
M M + + +GT CVL A +G +A+A E A LG + L+LA
Sbjct: 251 MQMQAVMGAAGTAVCVLGMAIKGDFQAVAREAAAFGLGAANYYLVLA 297
>11_04_0128 +
13752727-13752809,13752922-13753129,13753238-13753303,
13753611-13753767,13755629-13755712,13756355-13756461,
13756832-13756958,13757319-13757407,13757812-13757943
Length = 350
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 358 LSGTTYCVLSGASQGIGRAIAVEVAKL 438
L+G T +++G S+GIGRAI E+A L
Sbjct: 13 LAGAT-ALVTGGSKGIGRAIVEELASL 38
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 362 PAPRTASCPAPPRASGGPLPWRLRNFSVRNP-LSCSW 469
P P A P+A G PW LR + R P S SW
Sbjct: 154 PPPPPLLPMAQPQADGAARPWNLRQRTRRRPAASMSW 190
>04_04_0429 - 25150266-25150916
Length = 216
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 368 PRTASCPAPPRASGGPLPWRLRNFSVRNP 454
PR +S P PP SGG R+F + NP
Sbjct: 69 PRASSSPPPPPRSGGGGAEGSRDFLIANP 97
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.3 bits (60), Expect = 4.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 362 PAPRTASCPAPPRASGGPLPW 424
P P+ CP PP+ P PW
Sbjct: 233 PPPKQEPCPPPPKVVEVPYPW 253
>02_03_0079 + 14914035-14914160,14917101-14917361
Length = 128
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 356 IYPAPRTASCPAPPRASGG 412
+YPAP ++S P P ASGG
Sbjct: 92 LYPAPPSSSTPPPGAASGG 110
>11_04_0125 +
13723966-13724011,13724282-13724430,13725100-13725197,
13725321-13725528,13725678-13725695
Length = 172
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 358 LSGTTYCVLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQLA 492
L+G T +++G S+GIGRAI V +L+G S + AR++ +L+
Sbjct: 83 LAGAT-ALVTGRSKGIGRAI---VEELVGFGSTVHTCARSEAELS 123
>08_02_1095 -
24278295-24278741,24279066-24279307,24279647-24279731,
24279783-24280004
Length = 331
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 460 G*RISDREVSQPPRQWPARCPGRRRTGRSTWC 365
G R++ R + W RCPGRR R+ WC
Sbjct: 164 GERVASRGRTSNRISW--RCPGRRCAFRNDWC 193
>08_02_0839 + 21693348-21694853
Length = 501
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 378 RPVRRLPGHRAGHCRGGCETSRSEIR--YPAPGT*QRSARHHRRPLRVGQ 521
RP ++PGHR C + R R PG A+ + P +VG+
Sbjct: 326 RPTTQMPGHRVAMSECDCHSKRESFRGLDALPGGKLAQAQPPKPPAKVGK 375
>07_03_0766 -
21354494-21354772,21355094-21355247,21355340-21355577,
21355659-21355866,21356148-21356275,21356384-21356521,
21357234-21358080
Length = 663
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 173 DRRTRWWKTYQRTEPIASVV---CSGRAAIS 256
D RWWKT+ RT A +V CS R+ +S
Sbjct: 217 DLVARWWKTFPRTTVGARIVGTRCSLRSEVS 247
>03_03_0249 + 15832086-15833261
Length = 391
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 475 YVPGAG*RISDREVSQPPRQWPARCPGRRRTGRSTWC 365
Y AG R+ + P A PGRR GR WC
Sbjct: 112 YRSPAGLRLLRFAAEEVPAAVAAALPGRRAGGRGRWC 148
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 194 KTYQRTEPIASVVCSGRAAISTLLSGTQRPINY 292
++Y+ E + VCS R AIS+ LSGT +N+
Sbjct: 26 QSYKVLELNSEAVCSERNAISSSLSGTTVALNH 58
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 344 RLASIYPAPRTASCPAPPRASGGPLP---WR 427
RLAS P+ ++S PP AS P P WR
Sbjct: 156 RLASASPSTTSSSATPPPNASATPTPSLSWR 186
>07_03_0894 + 22362717-22363514
Length = 265
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKL 438
+++GAS+GIGRAIA ++ L
Sbjct: 27 IVTGASRGIGRAIAAHLSAL 46
>06_03_0673 +
23394027-23394094,23394267-23394539,23394613-23394958,
23395031-23395168,23395260-23395385,23395464-23395652,
23395723-23396202,23396274-23397236
Length = 860
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 435 FRNLHGNGPPDALGGAGQDAVRGAG*IDARRHS 337
FR P D L GA + AV G + +RRHS
Sbjct: 572 FRRYARASPADVLAGASRRAVAAMGILLSRRHS 604
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 365 APRTASCPAPPRASGGPLP 421
APRT+S P PP A P P
Sbjct: 143 APRTSSTPGPPSAQAPPPP 161
>09_02_0195 + 5643549-5645090
Length = 513
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 262 QGRDRSPPGANDRCNRLCTLISFPPPCSSIGPLLIFFPTR 143
QG + P ++ + + PPP IGPL++ P+R
Sbjct: 64 QGSSQQPLASSGEGSSRQAHTTAPPPAGLIGPLMLHAPSR 103
>05_05_0065 -
22069798-22069890,22070878-22071160,22071240-22071335,
22071456-22071558,22071633-22071693,22071816-22071887,
22072315-22072383,22072459-22072482,22073278-22073316,
22073862-22073951,22074063-22074095
Length = 320
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 241 PGANDRCNRLCTLISFPPPCSSIGPLLIFFP 149
PG N C L + PPP + LLI FP
Sbjct: 101 PGPNYHCREGSKLATLPPPNNVFEVLLINFP 131
>04_03_0047 + 10118929-10119276
Length = 115
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 374 TASCPAPPRASGGPLPW 424
TA P PPR + PLPW
Sbjct: 23 TAIVPPPPRRASVPLPW 39
>02_04_0094 + 19664434-19665078
Length = 214
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 396 PGHRAGHCRGGCETSRSEIRYPAPGT*QRSARHHRRPLRVGQ 521
P R C GG T+++ + P ++++R H R R+G+
Sbjct: 100 PAARMPTCAGGGGTAKAVVIAGLPAAARKASREHERRRRLGR 141
>02_01_0314 +
2106976-2107658,2107792-2107931,2108367-2108636,
2109938-2110254
Length = 469
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 399 GHRAGHCRGGCETSRSEIRY 458
GH +GH GG +S SEI Y
Sbjct: 50 GHESGHSSGGTFSSSSEIGY 69
>01_06_1353 +
36533795-36533827,36533904-36533993,36535595-36535681,
36535775-36535843,36536472-36536552,36536641-36536712,
36536814-36536874,36536960-36537062,36537223-36537318,
36537394-36537440,36538052-36538299
Length = 328
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 241 PGANDRCNRLCTLISFPPPCSSIGPLLIFFP 149
PG N C + + PPP + + LLI FP
Sbjct: 136 PGPNYHCREGSKMATLPPPHNVLEVLLINFP 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,554
Number of Sequences: 37544
Number of extensions: 420875
Number of successful extensions: 1661
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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