Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        24   3.6  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        24   3.6  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   6.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.2  

>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 24/84 (28%), Positives = 36/84 (42%)
 Frame = +2

Query: 212 EPIASVVCSGRAAISTLLSGTQRPINYWRTNRSLNKLCE*KWLCRLASIYPAPRTASCPA 391
           +PI S  C GR A    +SG++     W+  RS   +C     C+ +    A  +  C  
Sbjct: 56  KPIPSFACIGRCASYIQVSGSK----IWQMERSC--MC-----CQESGEREASVSLFC-- 102

Query: 392 PPRASGGPLPWRLRNFSVRNPLSC 463
            P+A  G    + R  S + PL C
Sbjct: 103 -PKAKNGEK--KFRKVSTKAPLEC 123


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 24/84 (28%), Positives = 36/84 (42%)
 Frame = +2

Query: 212 EPIASVVCSGRAAISTLLSGTQRPINYWRTNRSLNKLCE*KWLCRLASIYPAPRTASCPA 391
           +PI S  C GR A    +SG++     W+  RS   +C     C+ +    A  +  C  
Sbjct: 56  KPIPSFACIGRCASYIQVSGSK----IWQMERSC--MC-----CQESGEREASVSLFC-- 102

Query: 392 PPRASGGPLPWRLRNFSVRNPLSC 463
            P+A  G    + R  S + PL C
Sbjct: 103 -PKAKNGEK--KFRKVSTKAPLEC 123


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +3

Query: 396 PGHRAGHCRGGCETSRSEIRYPAPGT*QRSARHHRRP 506
           P HR  HC    + +  E   PA GT    +  H  P
Sbjct: 407 PIHRIQHCTCMLQNNARESISPASGTGMSPSYPHSEP 443


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 388  GASQGIGRAIAVEVAKLLG 444
            G  +G+G A  VEV K LG
Sbjct: 2125 GEGRGVGEAEDVEVPKALG 2143


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 432  ETSRSEIRYPAPGT*QRSARHHRRP 506
            ETS+ +I    P   Q+  RH +RP
Sbjct: 2971 ETSKRDIPNIPPAPEQQPVRHQQRP 2995


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,195
Number of Sequences: 2352
Number of extensions: 12856
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)