Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311G01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 34 0.054
AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical ... 31 0.38
Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical p... 29 1.5
Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical p... 29 1.5
U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical pr... 29 2.7
U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,... 29 2.7
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 28 3.5
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81089-4|CAB03138.3| 425|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 27 6.2
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 27 8.1
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical pr... 27 8.1
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 8.1
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.1
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical ... 27 8.1
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 34.3 bits (75), Expect = 0.054
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQLAITAALCESD 519
+++GAS GIG+ A+ AK K + L RN D L AALC S+
Sbjct: 5 IITGASSGIGKGTALLFAK---KKYQLSLTGRNTDSLKEVAALCISE 48
>AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical
protein W02H5.2 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 91 DNFQPSTEKLADSPQYLALLERKLKAVRSKNK-----VVENLSAYRADCIGRLLRE 243
D F P YLA LE++LKAV+ K K +++++ + + D I +LL +
Sbjct: 35 DPFAPQANTRQTDNTYLAALEKRLKAVKDKKKIDSKSILKDIESLKNDQIFKLLSQ 90
>Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQLAITAALC 510
++SG+S+GIG+A AV+ A G K I+L R+ D + T LC
Sbjct: 12 LISGSSKGIGQATAVKFA-AEGAK--IVLNGRSADDVEKTRKLC 52
>Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQLAITAALC 510
++SG+S+GIG+A AV+ A G K I+L R+ D + T LC
Sbjct: 12 LISGSSKGIGQATAVKFA-AEGAK--IVLNGRSADDVEKTRKLC 52
>U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical
protein T25G12.2 protein.
Length = 537
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQL 489
V++GAS G+G+++A E+ K + ++LLAR+ ++L
Sbjct: 82 VITGASSGLGKSLAFELYK---RGAQVILLARSTEKL 115
>U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,
short chain protein30 protein.
Length = 311
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQL 489
V++GAS G+G+++A E+ K + ++LLAR+ ++L
Sbjct: 51 VITGASSGLGKSLAFELYK---RGAQVILLARSTEKL 84
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 429 NLHGNGPPDALGGAGQDAVRG 367
N+H GPP +GG+G V G
Sbjct: 235 NIHEGGPPGIVGGSGAPGVHG 255
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 121 ADSPQYLALLERKLKAVRSKNKVVENLSAYRADCIGRLLREGCDLDPVIGDTEADKLLED 300
A S + +ALL + ++ ++V N + + I L EG DLD I T+A KLLE
Sbjct: 342 AMSDKKIALLSPQFMSILP-DEVANNTISLLSPSILSLHGEGSDLDRQISLTKALKLLES 400
Query: 301 KPESE 315
+ E
Sbjct: 401 TGQEE 405
>Z81089-4|CAB03138.3| 425|Caenorhabditis elegans Hypothetical
protein F53H4.5 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 98 KLSSKFDIIPLFPTSEPQGSIQAKATSLVPNS 3
K S+ I P PTS+P G ++ T L+P +
Sbjct: 74 KCQSRNYITPKDPTSDPSGRRRSSTTKLIPQN 105
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 284 INYWRTNRSLNKLCE*KWLCRLASIYPAPRTASC 385
++ W++N + ++ + LC+ AS+ PAP T C
Sbjct: 107 LSIWQSNIDITEMY--RALCKSASLIPAPHTLFC 138
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 151 ERKLKAVRSKNKVVENLSAYRADCIGRLLREGC 249
ER +K++R NK++EN S R GR + C
Sbjct: 645 ERCVKSLRRLNKIIENCSRLRVGEPGRQIVVSC 677
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 79 SNFEDNFQPSTEKLADSPQYLALLERKLKAVRSKNKVVENLSAYRADC 222
+NF D+FQ + LA P L+ ++ + V K K +EN A C
Sbjct: 344 NNFRDDFQTDSALLATIPDLLSQIDDYDRNV-DKKKFLENFEATFRTC 390
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQL 489
+++GASQGIG+ I + +AK + ++ ARN+ L
Sbjct: 13 LVTGASQGIGKEICLSLAK---AGAQVIAFARNEANL 46
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 379 VLSGASQGIGRAIAVEVAKLLGPKSVILLLARNKDQL 489
+++GASQGIG+ I + +AK + ++ ARN+ L
Sbjct: 13 LVTGASQGIGKEICLSLAK---AGAQVIAFARNEANL 46
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 307 PVCPPIVYRPLCPR*QGRDRSPPGANDRCNRLCTLISFPPPCSSI 173
P+CPP P P QG+ + PPG + + CT++ P C +
Sbjct: 101 PICPP--GPPGQPGQQGQ-KGPPGVPGQRGQDCTIVYAPIICPPV 142
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 376 CVLSGASQGIGRAIAVEVAKLLGPKSVILLLARN 477
C++SG + GIG AI E L PKS +++ +N
Sbjct: 5013 CLISGGTGGIGSAIINE----LKPKSSVIITRKN 5042
>U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical
protein F53B3.6 protein.
Length = 321
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 240 GGLRSRPCYRGHRGR*TIGGQTGV*ISFVSKNGYVV*HRFIRHHVLRPVRRLPGHRAGHC 419
GG RS +R H + GG G SF + G + + H +RPVR + HR C
Sbjct: 242 GGYRSSSHHRSHHE--SHGG--GHESSFGASRGAITQQPQVYHQDMRPVRPVQHHRVQCC 297
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PAPRTASCPAPPRASGGPLP 421
P P + P PP+AS GP P
Sbjct: 1046 PPPASYGAPTPPQASYGPAP 1065
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PAPRTASCPAPPRASGGPLP 421
P P + P PP+AS GP P
Sbjct: 1066 PPPASYGAPTPPQASYGPAP 1085
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 27.1 bits (57), Expect = 8.1
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +1
Query: 55 EVGNKGIISNFEDNFQPSTEKLADSPQYLALLERKLKAVRSKNKVVENLSAYRADCIGRL 234
EV G +S+F + P E Q A+L +K K R K V++ + + C
Sbjct: 94 EVRVDGSLSSFSLDI-PEDEDFG--VQVCAILSKKRK--RPKFGVIQVIPFQCSSCKSSQ 148
Query: 235 LREGCDLDPVIGDTEADKLLEDK 303
+ D P+IG T +K +DK
Sbjct: 149 TNDCADCGPIIGSTVLEKDWKDK 171
>AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical
protein Y9C9A.8 protein.
Length = 666
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 10 GTRLVAFA*MDPWGSEVGNKGIISNFEDNFQPSTEKLADSP 132
G ++ F D W +GNK + N E F T L+ P
Sbjct: 321 GADVIGFREFDFWFHGLGNKSLSLNSEIEFDSKTSPLSKMP 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,885,446
Number of Sequences: 27780
Number of extensions: 300625
Number of successful extensions: 1112
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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