Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311F12f
(397 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 199 2e-50
UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chai... 196 1e-49
UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=7... 195 2e-49
UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming] beta-... 195 2e-49
UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=9... 193 9e-49
UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=1... 193 1e-48
UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=3... 192 2e-48
UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=2... 191 5e-48
UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=8... 191 5e-48
UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 187 8e-47
UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=1... 187 8e-47
UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=2... 185 2e-46
UniRef50_Q01AE3 Cluster: Succinyl CoA ligase beta subunit; n=1; ... 184 4e-46
UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 183 1e-45
UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102, w... 179 2e-44
UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular organisms... 178 4e-44
UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific suc... 176 1e-43
UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase be... 173 8e-43
UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 173 8e-43
UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 173 1e-42
UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=1... 168 3e-41
UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta ... 166 2e-40
UniRef50_Q8D2D7 Cluster: SucC protein; n=4; Gammaproteobacteria|... 165 2e-40
UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3... 163 8e-40
UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, wh... 163 1e-39
UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n... 158 3e-38
UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 157 7e-38
UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase (ADP-form... 156 1e-37
UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit; ... 156 1e-37
UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit f... 151 4e-36
UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7... 148 4e-35
UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;... 147 8e-35
UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit, p... 146 1e-34
UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1... 145 2e-34
UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5... 143 1e-33
UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;... 142 3e-33
UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase be... 135 3e-31
UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10; Ascomyco... 133 1e-30
UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 132 2e-30
UniRef50_A2QQL9 Cluster: Contig An08c0100, complete genome; n=5;... 132 3e-30
UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n... 130 1e-29
UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit, putat... 129 2e-29
UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2... 127 7e-29
UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8... 122 2e-27
UniRef50_UPI000023F608 Cluster: hypothetical protein FG07900.1; ... 121 6e-27
UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6... 121 6e-27
UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit; ... 120 1e-26
UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 119 2e-26
UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=4... 119 2e-26
UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit; ... 117 7e-26
UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit; ... 115 4e-25
UniRef50_Q5DG82 Cluster: SJCHGC06370 protein; n=1; Schistosoma j... 114 7e-25
UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1; ... 114 7e-25
UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n... 110 8e-24
UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3... 109 2e-23
UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n... 109 3e-23
UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n... 107 8e-23
UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n... 107 1e-22
UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4... 106 1e-22
UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein NCU098... 105 4e-22
UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1; Rhodopseudo... 103 1e-21
UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 103 2e-21
UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus ... 101 5e-21
UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n... 100 9e-21
UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n... 97 1e-19
UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine ligase-... 93 1e-18
UniRef50_A1FZP5 Cluster: Putative uncharacterized protein; n=2; ... 93 2e-18
UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho... 93 2e-18
UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6... 92 3e-18
UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine ligase-... 91 7e-18
UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), bet... 91 7e-18
UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family; ... 89 3e-17
UniRef50_Q4PDA9 Cluster: Putative uncharacterized protein; n=1; ... 88 5e-17
UniRef50_Q05FP0 Cluster: Succinyl-CoA synthetase beta subunit; n... 86 3e-16
UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1... 81 8e-15
UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1; Fervidobact... 77 1e-13
UniRef50_Q1VJG8 Cluster: Putative uncharacterized protein; n=1; ... 75 4e-13
UniRef50_A4M0C4 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-12
UniRef50_A5P1R6 Cluster: Putative uncharacterized protein; n=1; ... 67 1e-10
UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4; ... 59 3e-08
UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma j... 58 8e-08
UniRef50_A0VLY8 Cluster: Putative uncharacterized protein; n=2; ... 53 2e-06
UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb CG106... 52 4e-06
UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2; Oscillatori... 52 4e-06
UniRef50_A5P1R4 Cluster: Putative uncharacterized protein; n=1; ... 51 7e-06
UniRef50_Q8FMQ2 Cluster: Putative uncharacterized protein; n=1; ... 48 7e-05
UniRef50_Q08WT9 Cluster: Putative uncharacterized protein; n=1; ... 48 9e-05
UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta... 45 6e-04
UniRef50_Q17DQ8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine ligase-... 39 0.040
UniRef50_A0VT03 Cluster: Putative uncharacterized protein; n=1; ... 38 0.093
UniRef50_A7DCY4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.12
UniRef50_Q64CM7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.66
UniRef50_Q181Y9 Cluster: Putative multidrug efflux pump, membran... 33 2.0
UniRef50_A4G6C1 Cluster: Sensor protein; n=2; Oxalobacteraceae|R... 33 2.0
UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4... 33 2.7
UniRef50_A6CGW6 Cluster: Polyhydroxyalkanoate synthesis represso... 33 2.7
UniRef50_UPI0000DD8625 Cluster: PREDICTED: hypothetical protein;... 32 3.5
UniRef50_Q3A4D7 Cluster: Putative amino-sugar biosynthesis prote... 32 3.5
UniRef50_A3GFF1 Cluster: Actin-related protein; n=4; Saccharomyc... 32 3.5
UniRef50_Q8YMR3 Cluster: Subtilase family peptidase; n=4; Cyanob... 32 4.6
UniRef50_Q6C1U6 Cluster: Similar to wi|NCU09191.1 Neurospora cra... 32 4.6
UniRef50_A2TPX2 Cluster: Type I restriction modification system ... 31 6.1
UniRef50_Q01BG0 Cluster: Chromosome 04 contig 1, DNA sequence; n... 31 6.1
UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11; Chlorobi... 31 8.1
UniRef50_A3J614 Cluster: Glucose/galactose transporter family pr... 31 8.1
UniRef50_A0QRE3 Cluster: Dipeptide transport system permease pro... 31 8.1
UniRef50_A5KAL8 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=35; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 421
Score = 199 bits (485), Expect = 2e-50
Identities = 94/130 (72%), Positives = 105/130 (80%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
T Q DAK FDD A FRQKE+F++RD TQEDP+E+ AAK +LNYI LDG IGCMVNG
Sbjct: 240 TNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNG 299
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMDIIKL+GG PANFLDVGG A+ V EAFKI+ SD KV AILVNIFGGIM+C
Sbjct: 300 AGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKC 359
Query: 367 DVXAEGIINA 396
DV A GI+NA
Sbjct: 360 DVIASGIVNA 369
>UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chain;
n=5; Escherichia coli|Rep: SucC, succinyl-CoA synthetase
beta chain - Escherichia coli (strain UTI89 / UPEC)
Length = 389
Score = 196 bits (478), Expect = 1e-49
Identities = 93/130 (71%), Positives = 107/130 (82%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
TG+F C DAK DD A +R EL LRD TQEDP+E +AAK +LNY++LDGNIGCMVNG
Sbjct: 209 TGEFMCADAKVSLDDNALYRHPELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNG 268
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMDIIKLYG PANFLDVGGGAT + VSEAF++I+SD KV AILVNIFGGI+RC
Sbjct: 269 AGLAMATMDIIKLYGEQPANFLDVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRC 328
Query: 367 DVXAEGIINA 396
D+ A II+A
Sbjct: 329 DMIARAIIHA 338
>UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=76;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Bacillus subtilis
Length = 385
Score = 195 bits (476), Expect = 2e-49
Identities = 90/129 (69%), Positives = 105/129 (81%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G LDAK FD A +RQK++ RD +EDPKEIEA+KY+L+YI+LDGNIGCMVNGA
Sbjct: 207 GNVMALDAKLNFDSNALYRQKDIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM+TMDIIK YGG+PANFLDVGGGAT + V+EAFKIILSD V I VNIFGGIM+CD
Sbjct: 267 GLAMSTMDIIKHYGGEPANFLDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCD 326
Query: 370 VXAEGIINA 396
V AEG++ A
Sbjct: 327 VIAEGVVEA 335
>UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor; n=82; cellular
organisms|Rep: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 463
Score = 195 bits (476), Expect = 2e-49
Identities = 91/129 (70%), Positives = 106/129 (82%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G C+DAK FD + +RQK++F L+D TQED ++ +AAK NLNYI LDGNIGC+VNGA
Sbjct: 266 GAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGA 325
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDIIKL+GG PANFLDVGGGAT V+EAFK+I SD KV AILVNIFGGIMRCD
Sbjct: 326 GLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCD 385
Query: 370 VXAEGIINA 396
V A+GI+ A
Sbjct: 386 VIAQGIVMA 394
>UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=99;
Proteobacteria|Rep: Succinyl-CoA synthetase beta chain -
Shigella flexneri
Length = 388
Score = 193 bits (471), Expect = 9e-49
Identities = 89/129 (68%), Positives = 106/129 (82%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G CLD K D A FRQ +L +RD +QEDP+E +AA++ LNY+ALDGNIGCMVNGA
Sbjct: 207 GDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM TMDI+KL+GG+PANFLDVGGGAT + V+EAFKIILSD KV A+LVNIFGGI+RCD
Sbjct: 267 GLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCD 326
Query: 370 VXAEGIINA 396
+ A+GII A
Sbjct: 327 LIADGIIGA 335
>UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=16;
Gammaproteobacteria|Rep: Succinyl-CoA synthetase beta
chain - Haemophilus influenzae
Length = 389
Score = 193 bits (470), Expect = 1e-48
Identities = 89/129 (68%), Positives = 104/129 (80%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G CLDAK DD A FR K+L +L+D TQ D +E EA K+ LNY+AL+G+IGCMVNGA
Sbjct: 207 GNLVCLDAKISVDDNALFRHKDLLALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM TMDI+KLYGG PANFLDVGGGAT + V+EAFKIIL+DP V ILVNIFGGI+RCD
Sbjct: 267 GLAMGTMDIVKLYGGKPANFLDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCD 326
Query: 370 VXAEGIINA 396
+ AEG+I A
Sbjct: 327 LIAEGVIAA 335
>UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=34;
cellular organisms|Rep: Succinyl-CoA synthetase beta
chain - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 398
Score = 192 bits (469), Expect = 2e-48
Identities = 90/129 (69%), Positives = 108/129 (83%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAK FD A FR +++ +LRDTT+ED KEIEA+KY+L Y+ALDGNIGCMVNGA
Sbjct: 217 GRMRVLDAKVSFDGNALFRHEDVVALRDTTEEDDKEIEASKYDLAYVALDGNIGCMVNGA 276
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDIIKLYG +PANFLDVGGGA+ + V++AFKII +DP V ILVNIFGGIM+CD
Sbjct: 277 GLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCD 336
Query: 370 VXAEGIINA 396
V AEG++ A
Sbjct: 337 VIAEGVLAA 345
>UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=21;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 388
Score = 191 bits (465), Expect = 5e-48
Identities = 90/129 (69%), Positives = 104/129 (80%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAK FDD A FR K++ LRD +EDPKEIEA+KY+L+YIALDG+IGCMVNGA
Sbjct: 207 GEVLALDAKINFDDNALFRHKDIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMD I +GG+PANFLDVGGGAT + V+EAFKIIL D V I VNIFGGIM+CD
Sbjct: 267 GLAMATMDTINHFGGNPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCD 326
Query: 370 VXAEGIINA 396
V AEGI+ A
Sbjct: 327 VIAEGIVAA 335
>UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=80;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhizobium loti (Mesorhizobium loti)
Length = 397
Score = 191 bits (465), Expect = 5e-48
Identities = 89/129 (68%), Positives = 105/129 (81%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAK FD+ A FR ++ LRDTT+ED KEIEA+KY+L Y+ALDGNIGCMVNGA
Sbjct: 217 GRLRVLDAKVSFDNNALFRHPDVLELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGA 276
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDIIKLYG +PANFLDVGGGA+ + V+ AFKII DP V IL+NIFGGIM+CD
Sbjct: 277 GLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITKDPAVKGILINIFGGIMKCD 336
Query: 370 VXAEGIINA 396
+ AEG+I A
Sbjct: 337 IIAEGVIAA 345
>UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=64;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 388
Score = 187 bits (455), Expect = 8e-47
Identities = 87/129 (67%), Positives = 105/129 (81%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAKF FD A FR E+ + RD +ED EIEA+K++L YI+LDGNIGC+VNGA
Sbjct: 207 GKVIALDAKFNFDSNALFRHPEIVAYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMD IKL+GG+PANFLDVGGGAT + V+EAFK++L +P + AILVNIFGGIMRCD
Sbjct: 267 GLAMATMDTIKLFGGEPANFLDVGGGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCD 326
Query: 370 VXAEGIINA 396
V AEG+I A
Sbjct: 327 VIAEGVIAA 335
>UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=155;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 399
Score = 187 bits (455), Expect = 8e-47
Identities = 88/124 (70%), Positives = 103/124 (83%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMA 204
LDAK FD + FR ++ +LRD ++EDPKEIEA+KY+L YIALDG IGCMVNGAGLAMA
Sbjct: 222 LDAKLSFDGNSLFRHPDIKALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMA 281
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEG 384
TMDIIKLYG +PANFLDVGGGA+ + V+ AFKII +DP V ILVNIFGGIMRCD+ AEG
Sbjct: 282 TMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEG 341
Query: 385 IINA 396
+I A
Sbjct: 342 VIAA 345
>UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=29;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 397
Score = 185 bits (451), Expect = 2e-46
Identities = 89/129 (68%), Positives = 104/129 (80%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G LDAK FD A FR +++ +LRD T+ED KEIEA+K++L Y+ALDGNIGCMVNGA
Sbjct: 217 GHLRVLDAKMSFDGNALFRHEDVKALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGA 276
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDIIKLYG +PANF DVGGGA + V+ AFKII +DPKV ILVNIFGGIM+CD
Sbjct: 277 GLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCD 336
Query: 370 VXAEGIINA 396
V AEG+I A
Sbjct: 337 VIAEGVIAA 345
>UniRef50_Q01AE3 Cluster: Succinyl CoA ligase beta subunit; n=1;
Ostreococcus tauri|Rep: Succinyl CoA ligase beta subunit
- Ostreococcus tauri
Length = 261
Score = 184 bits (449), Expect = 4e-46
Identities = 85/125 (68%), Positives = 102/125 (81%)
Frame = +1
Query: 22 CLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAM 201
C+ D AE+RQ+E F+LRD +QED +E++A K++LNYI LDGNIGCMVNGAGLAM
Sbjct: 86 CVXXXXXXXDNAEYRQRETFALRDHSQEDAREVQAGKFDLNYIGLDGNIGCMVNGAGLAM 145
Query: 202 ATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAE 381
ATMDII+LYGG PANFLDVGG A+ + V EAFKI+ +DPKV AILVNIFGGIM+CDV A
Sbjct: 146 ATMDIIQLYGGSPANFLDVGGNASEEQVVEAFKILTADPKVKAILVNIFGGIMKCDVIAA 205
Query: 382 GIINA 396
GI+ A
Sbjct: 206 GIVAA 210
>UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor; n=23; Fungi/Metazoa
group|Rep: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 427
Score = 183 bits (445), Expect = 1e-45
Identities = 81/130 (62%), Positives = 103/130 (79%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
T + C DAKF FDD A FRQ++++S RD +QEDP E++A KY+LN++ L GNIGC+VNG
Sbjct: 246 THKIMCTDAKFGFDDNASFRQEKIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNG 305
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMD+IKL GGDPANFLD GGGAT + + + F++ILS+ V AI VNIFGGI+RC
Sbjct: 306 AGLAMATMDVIKLNGGDPANFLDCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRC 365
Query: 367 DVXAEGIINA 396
D A G++ A
Sbjct: 366 DYVALGLVEA 375
>UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_102, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 449
Score = 179 bits (436), Expect = 2e-44
Identities = 87/132 (65%), Positives = 101/132 (76%), Gaps = 4/132 (3%)
Frame = +1
Query: 13 QFFCLDAKFRFDDXAEFRQKELFSLRDTT----QEDPKEIEAAKYNLNYIALDGNIGCMV 180
Q FC+DAK DD A+FRQK+L LR T+ Q DP E A LNY+ALDGNIGCMV
Sbjct: 257 QLFCIDAKINVDDNAKFRQKQLVDLRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMV 316
Query: 181 NGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIM 360
NGAGLAMATMDIIKLYGG+PANFLDVGGGA + V AF+I+ S P+V IL+NIFGGIM
Sbjct: 317 NGAGLAMATMDIIKLYGGEPANFLDVGGGANVEQVKTAFEILNSHPRVETILINIFGGIM 376
Query: 361 RCDVXAEGIINA 396
+C++ AEGII A
Sbjct: 377 KCNIIAEGIIKA 388
>UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular
organisms|Rep: Suclg2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 419
Score = 178 bits (433), Expect = 4e-44
Identities = 83/129 (64%), Positives = 95/129 (73%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
GQ C DAK FDD AEFRQK +FS+ DT + DP E EAAKY+L YI +DGNI C VNGA
Sbjct: 238 GQVVCFDAKINFDDNAEFRQKAVFSMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGA 297
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT DII L+GG PANFLD+GGG V AFK++ +DPKV AILVNIFGGI+ C
Sbjct: 298 GLAMATCDIIDLHGGKPANFLDLGGGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCA 357
Query: 370 VXAEGIINA 396
+ A GI A
Sbjct: 358 IIANGITKA 366
>UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit; n=1; Toxoplasma
gondii|Rep: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit - Toxoplasma gondii
Length = 498
Score = 176 bits (428), Expect = 1e-43
Identities = 82/129 (63%), Positives = 98/129 (75%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ DAK FDD A FRQK++FS RD +QEDP+E+ A +LNYI L+G+IGCMVNGA
Sbjct: 295 GRVLVCDAKLNFDDNAGFRQKDIFSQRDYSQEDPREVAADAADLNYIGLEGSIGCMVNGA 354
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDII L+GG PANFLDVGGGA + EA KII D + +LVNIFGGIMRCD
Sbjct: 355 GLAMATMDIIHLHGGSPANFLDVGGGADQHQIIEALKIIQQDKRANCVLVNIFGGIMRCD 414
Query: 370 VXAEGIINA 396
V A+G++ A
Sbjct: 415 VIAKGLVAA 423
>UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=9; Plasmodium|Rep: ATP-specific
succinyl-CoA synthetase beta subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 462
Score = 173 bits (422), Expect = 8e-43
Identities = 78/129 (60%), Positives = 99/129 (76%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ C DAK FDD AE+RQK +F RD TQE+ +E+ A KYNLNY++L+GNI CMVNGA
Sbjct: 268 GRVLCCDAKLNFDDNAEYRQKNIFEKRDLTQENKEELLAKKYNLNYVSLNGNIACMVNGA 327
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT+D+I L+ G+P+NFLDVGGGAT + ++EA KII ++ +NI GGIMRCD
Sbjct: 328 GLAMATLDLIILHKGNPSNFLDVGGGATEEEITEALKIINNNENAKICFINILGGIMRCD 387
Query: 370 VXAEGIINA 396
+ A GIINA
Sbjct: 388 IIANGIINA 396
>UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor; n=7; Trichomonas
vaginalis|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor - Trichomonas
vaginalis
Length = 407
Score = 173 bits (422), Expect = 8e-43
Identities = 80/129 (62%), Positives = 97/129 (75%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ +D+KF FDD A +RQK++F RD Q +P EI A KY LNY+ LDGN+ C+VNGA
Sbjct: 224 GRIITVDSKFNFDDSAHYRQKQIFGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGA 283
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMD+IKL GGDPANFLD+GG A+ AV+E F II V AILVNIFGGI+RCD
Sbjct: 284 GLAMATMDVIKLAGGDPANFLDLGGAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCD 343
Query: 370 VXAEGIINA 396
+ A G+I A
Sbjct: 344 MVAAGVIAA 352
>UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=55; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 432
Score = 173 bits (421), Expect = 1e-42
Identities = 81/129 (62%), Positives = 96/129 (74%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
GQ C DAK FDD AEFRQK++F++ D ++ +P E EAAKY+L YI LDGNI C VNGA
Sbjct: 251 GQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGA 310
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT DII L GG PANFLD+GGG V +AFK++ +DPKV AILVNIFGGI+ C
Sbjct: 311 GLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCA 370
Query: 370 VXAEGIINA 396
+ A GI A
Sbjct: 371 IIANGITKA 379
>UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=14;
Campylobacter|Rep: Succinyl-CoA synthetase beta chain -
Campylobacter jejuni
Length = 387
Score = 168 bits (409), Expect = 3e-41
Identities = 78/129 (60%), Positives = 97/129 (75%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G F+ LDAK FDD A +R E+ LRDTT+E+P E EAA++ L+Y+ LDG++ CMVNGA
Sbjct: 207 GDFYALDAKCSFDDSALYRHPEIAELRDTTEENPAEREAAEFGLSYVKLDGDVACMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMDII G PANFLDVGGGA+ + V++AF+IIL D V I +NIFGGI+RCD
Sbjct: 267 GLAMATMDIINYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCD 326
Query: 370 VXAEGIINA 396
A GI+ A
Sbjct: 327 RIANGILEA 335
>UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta
chain; n=1; Desulfotalea psychrophila|Rep: Probable
succinyl-CoA synthetase, beta chain - Desulfotalea
psychrophila
Length = 386
Score = 166 bits (403), Expect = 2e-40
Identities = 77/128 (60%), Positives = 94/128 (73%)
Frame = +1
Query: 13 QFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAG 192
Q LDAK D A FRQ+EL + D ++DP E EAAK+NLNYI L GN+G MVNGAG
Sbjct: 207 QLIALDAKVDTDSNALFRQRELQKMHDPAEDDPAEAEAAKFNLNYIKLSGNVGNMVNGAG 266
Query: 193 LAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDV 372
LAMATMDIIK G +PANFLDVGG A + + F+IIL+D V AIL+NIFGGI+RCD+
Sbjct: 267 LAMATMDIIKRAGAEPANFLDVGGSADAERIENGFRIILADTNVKAILINIFGGILRCDI 326
Query: 373 XAEGIINA 396
A+G++ A
Sbjct: 327 LAQGVVQA 334
>UniRef50_Q8D2D7 Cluster: SucC protein; n=4;
Gammaproteobacteria|Rep: SucC protein - Wigglesworthia
glossinidia brevipalpis
Length = 396
Score = 165 bits (402), Expect = 2e-40
Identities = 78/125 (62%), Positives = 92/125 (73%)
Frame = +1
Query: 22 CLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAM 201
CLD K DD A +R L+ D +Q D +E+ AA NLNYI LDGNIGCMVNGAGLAM
Sbjct: 211 CLDGKIIIDDNAIYRNYSLYEEHDNSQLDKREVYAANDNLNYIPLDGNIGCMVNGAGLAM 270
Query: 202 ATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAE 381
TMD+IK +GG+PANFLDVGG T + V +AFKIIL D V ILVNIFGGI+RCD+ +
Sbjct: 271 GTMDLIKFHGGNPANFLDVGGNTTVEKVEKAFKIILLDSNVKVILVNIFGGIVRCDLISN 330
Query: 382 GIINA 396
GIIN+
Sbjct: 331 GIINS 335
>UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhodopirellula baltica
Length = 394
Score = 163 bits (397), Expect = 8e-40
Identities = 76/129 (58%), Positives = 94/129 (72%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAK FD+ A FR K+L LRD ++E+ E+ A K L+Y+ LDGNI C+VNGA
Sbjct: 215 GEMVALDAKIIFDENAMFRHKDLEELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGA 274
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM+TMDIIK +GG+PANFLDVGGGA V+EAF+I+LSDP +LVNIFGGI RC
Sbjct: 275 GLAMSTMDIIKYHGGEPANFLDVGGGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCT 334
Query: 370 VXAEGIINA 396
A +I A
Sbjct: 335 TIAGALITA 343
>UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 429
Score = 163 bits (396), Expect = 1e-39
Identities = 78/129 (60%), Positives = 90/129 (69%)
Frame = +1
Query: 4 LTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVN 183
L G D K DD ++FRQ +F + D Q+D KE+EA K+ LNYIALDGNIGCMVN
Sbjct: 232 LQGNLIICDQKLNIDDNSQFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVN 291
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAGLAMATMD+IK Y G PANFLDVGG AT Q + A KI+ DP V AILVNIF GI R
Sbjct: 292 GAGLAMATMDLIKQYEGSPANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIAR 351
Query: 364 CDVXAEGII 390
CD G++
Sbjct: 352 CDQIVLGLL 360
>UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Vesicomyosocius okutanii HA|Rep: Succinyl-CoA
synthetase beta subunit - Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA)
Length = 386
Score = 158 bits (384), Expect = 3e-38
Identities = 73/128 (57%), Positives = 96/128 (75%)
Frame = +1
Query: 13 QFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAG 192
+ LD K FDD A +R K++ +LRD +QED KE A Y+LNYI+L+G IGCMVNGAG
Sbjct: 208 KLLALDGKIDFDDNALYRHKDIIALRDISQEDEKERLANIYHLNYISLNGTIGCMVNGAG 267
Query: 193 LAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDV 372
LAMATMD+I+ +GG PANFLDVGG T V++AF++I ++ + ILVNIFGGI+ CD+
Sbjct: 268 LAMATMDLIEHFGGSPANFLDVGGDTTADRVAKAFELIQTEENIKGILVNIFGGIVHCDL 327
Query: 373 XAEGIINA 396
A+GI+ A
Sbjct: 328 IAQGILQA 335
>UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=2; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter propionicus (strain DSM 2379)
Length = 394
Score = 157 bits (381), Expect = 7e-38
Identities = 76/129 (58%), Positives = 95/129 (73%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G +D K FDD A R E L D +Q +P EI AA+++L+YI L G IGCMVNGA
Sbjct: 206 GWLVAMDTKMTFDDNALQRHCEYPDLVDYSQLNPLEIAAARFDLSYIKLSGAIGCMVNGA 265
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT+D++K GG+PANFLDVGGGA+ + V+EAF+IIL D V + VNIFGGIMRCD
Sbjct: 266 GLAMATLDVLKEAGGEPANFLDVGGGASREKVAEAFRIILQDRDVRGVFVNIFGGIMRCD 325
Query: 370 VXAEGIINA 396
+ A+GII+A
Sbjct: 326 IIAQGIIDA 334
>UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase
(ADP-forming) beta chain; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Probable succinate-CoA ligase
(ADP-forming) beta chain - Protochlamydia amoebophila
(strain UWE25)
Length = 389
Score = 156 bits (379), Expect = 1e-37
Identities = 75/129 (58%), Positives = 92/129 (71%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G LDAK DD A F+ ++L +L D +Q E A ++ L Y+AL+G IGCMVNGA
Sbjct: 207 GHLLALDAKLSIDDNALFKHEDLKTLFDPSQMSNNEARAQQFELAYVALEGEIGCMVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMATMD+I+ +GG PANFLDVGGGA+ V+E F+IILSD V AIL+NIFGGIM C+
Sbjct: 267 GLAMATMDLIQYHGGRPANFLDVGGGASQVKVAEGFRIILSDSNVKAILINIFGGIMNCE 326
Query: 370 VXAEGIINA 396
A GII A
Sbjct: 327 TLASGIIEA 335
>UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 388
Score = 156 bits (379), Expect = 1e-37
Identities = 74/129 (57%), Positives = 92/129 (71%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ +DAK DD A FRQKE+ D +Q P E+ AA ++ YI +DG IGC+VNGA
Sbjct: 206 GRLMAMDAKVSIDDSALFRQKEMLEWLDESQLAPLEVRAAHSDIAYIKMDGCIGCLVNGA 265
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT+D++ GG PANFLDVGGGA V EAF+I+L DP V +LVNIFGGIMRCD
Sbjct: 266 GLAMATLDMLSECGGQPANFLDVGGGADQDKVVEAFRILLEDPAVEGVLVNIFGGIMRCD 325
Query: 370 VXAEGIINA 396
+ A+G+I A
Sbjct: 326 LIAQGLIAA 334
>UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit
family protein; n=2; cellular organisms|Rep:
Succinyl-CoA synthetase, beta subunit family protein -
Tetrahymena thermophila SB210
Length = 534
Score = 151 bits (367), Expect = 4e-36
Identities = 75/131 (57%), Positives = 88/131 (67%)
Frame = +1
Query: 4 LTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVN 183
+ G+ D K DD A +RQ E+ + D TQ+D KEIEA + LNYIALDGNIGCMVN
Sbjct: 337 IDGKLLICDQKMNVDDNAAYRQPEIAQMEDITQKDSKEIEADQNALNYIALDGNIGCMVN 396
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAGLAMATMD+I+ G PANFLD GG A + V A KI+ DP V AI VNIF GI R
Sbjct: 397 GAGLAMATMDLIQSKNGMPANFLDCGGKADDRQVFAALKIMEQDPNVEAIFVNIFAGITR 456
Query: 364 CDVXAEGIINA 396
CD+ G+I A
Sbjct: 457 CDIICLGLIRA 467
>UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7;
Chlamydiaceae|Rep: Succinyl-CoA synthetase beta chain -
Chlamydophila caviae
Length = 388
Score = 148 bits (358), Expect = 4e-35
Identities = 68/127 (53%), Positives = 89/127 (70%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G LDAK DD A +R +L L D +QE+ +++ A + L+YIALDGNIGC+VNGA
Sbjct: 207 GDLLVLDAKITIDDNALYRHPKLEVLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGA 266
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM+T+DI+K++GG ANFLDVGG AT Q V EA ++LSD V + +NIFGGIM C
Sbjct: 267 GLAMSTLDILKIHGGSAANFLDVGGSATEQQVQEAVSLVLSDENVEVLFINIFGGIMDCS 326
Query: 370 VXAEGII 390
A G++
Sbjct: 327 AVASGLV 333
>UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 263
Score = 147 bits (356), Expect = 8e-35
Identities = 73/129 (56%), Positives = 94/129 (72%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G C+DAK FD + + QK++F L+ TQED ++ +AAK +NYI L+G IGC+VNGA
Sbjct: 69 GGVLCMDAKINFDSNSLYCQKKIFDLQGWTQEDERDNDAAKEGINYIGLNGKIGCLVNGA 128
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
+ATMDIIKL+GG PANFLDVG GA+ ++ +FK+I SD KV AILVNIFG IMR
Sbjct: 129 ---VATMDIIKLHGGMPANFLDVGDGASVNQMTHSFKLITSDKKVQAILVNIFGEIMRYG 185
Query: 370 VXAEGIINA 396
V A+GI+ A
Sbjct: 186 VIAQGIVMA 194
>UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit,
putative; n=5; Trichocomaceae|Rep: Succinyl-CoA
synthetase beta subunit, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 407
Score = 146 bits (354), Expect = 1e-34
Identities = 72/129 (55%), Positives = 91/129 (70%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G F CLDAKF FD+ A+FRQ E+FS + E EA + L YI L+G+IG +VNGA
Sbjct: 226 GSFVCLDAKFEFDNAAQFRQPEVFSKEERMPGFEDEYEAQMHGLVYIRLNGHIGNIVNGA 285
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAMAT D+I L+GG ANFLD+GG AT + + +AF+I+ D +V I VNIFGGI+RCD
Sbjct: 286 GLAMATNDLINLHGGKCANFLDIGGKATTETLLKAFEILSRDQQVRGIFVNIFGGIVRCD 345
Query: 370 VXAEGIINA 396
+ AE II A
Sbjct: 346 MIAESIIQA 354
>UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 398
Score = 145 bits (352), Expect = 2e-34
Identities = 68/127 (53%), Positives = 88/127 (69%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
+G+ LD K DD A +R L SL + +E+ E A+ LNYI L+G++GCMVNG
Sbjct: 215 SGEPVALDGKVNVDDNALYRHPPLASLHEKEEENALEAAASALGLNYIKLNGSVGCMVNG 274
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMD+IK+ G +PANFLDVGGGA+ + E +I+L+D V + VNIFGGI+RC
Sbjct: 275 AGLAMATMDLIKMTGAEPANFLDVGGGASVSRIREGLRIVLADRNVKILFVNIFGGILRC 334
Query: 367 DVXAEGI 387
D AEGI
Sbjct: 335 DTVAEGI 341
>UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5;
Bacteroides|Rep: Succinyl-CoA synthetase beta chain -
Bacteroides fragilis
Length = 382
Score = 143 bits (346), Expect = 1e-33
Identities = 65/129 (50%), Positives = 87/129 (67%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G +DAK FDD A +R +L L + T+++ E A + +Y+ +DG IGCMVNGA
Sbjct: 200 GTLLAIDAKMVFDDNALYRHPDLQKLSEPTEDEKLEAIAKERGFSYVRMDGEIGCMVNGA 259
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM TMD+IKLYGG+PANFLD+GG + V EA +++L D KV + +NIFGGI RCD
Sbjct: 260 GLAMTTMDMIKLYGGNPANFLDIGGSSNPVKVIEAMRLLLDDKKVKVVFINIFGGITRCD 319
Query: 370 VXAEGIINA 396
A G++ A
Sbjct: 320 DVAIGLLQA 328
>UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;
n=1; Theileria annulata|Rep: Succinyl-coA ligase,
subunit, putative - Theileria annulata
Length = 433
Score = 142 bits (343), Expect = 3e-33
Identities = 67/130 (51%), Positives = 92/130 (70%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
+G+ D+K DD A++RQKELF + T+ +E EA + LNYI+LDGN+ C+VNG
Sbjct: 252 SGEILACDSKLIVDDNAKYRQKELFDMTPVTRTREEE-EADRAGLNYISLDGNVACIVNG 310
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMD+I+ +GG ANFLDVGG +T + +S+A +I+ SD + +LVNI GGI+RC
Sbjct: 311 AGLAMATMDLIQHHGGRAANFLDVGGNSTSETLSKALEIVNSDTRAKVLLVNIVGGIVRC 370
Query: 367 DVXAEGIINA 396
D AE + A
Sbjct: 371 DKFAESFVEA 380
>UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=1; Theileria parva|Rep:
ATP-specific succinyl-CoA synthetase beta subunit,
putative - Theileria parva
Length = 453
Score = 135 bits (327), Expect = 3e-31
Identities = 65/123 (52%), Positives = 87/123 (70%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMAT 207
DAK DD A++RQ ELF + + +E EA + LNYI+LDGN+ C+VNGAGLAMAT
Sbjct: 279 DAKLIVDDNAKYRQSELFDMTPVIRTKEEE-EADRAGLNYISLDGNVACIVNGAGLAMAT 337
Query: 208 MDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGI 387
MD+I+ +GG ANFLDVGG +T + +S+A +I+ SD + +LVNI GGI+RCD AE
Sbjct: 338 MDLIQHHGGKAANFLDVGGNSTPETLSKALEIVNSDLRAKVLLVNIVGGIVRCDKFAESF 397
Query: 388 INA 396
+ A
Sbjct: 398 VEA 400
>UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10;
Ascomycota|Rep: Succinyl-CoA synthetase - Aspergillus
oryzae
Length = 688
Score = 133 bits (321), Expect = 1e-30
Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 31 AKFRFDDXA---EFRQKELFSLRDTTQEDPKEIEAAKYNLNYIAL--DGNIGCMVNGAGL 195
A+F FDD A RQKE+ SLR+ +E +E+EA K + Y+ L +G+IG +VNGAGL
Sbjct: 506 ARFGFDDAAFRSSGRQKEVHSLRNPAEEVHEEVEAEKDGIVYVKLQGEGSIGTLVNGAGL 565
Query: 196 AMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVX 375
AM T+D + ++GG ANFLD GG AT + V +F+II SDP+V AI VNIFGG+ RCD+
Sbjct: 566 AMNTVDALTIHGGHCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMI 625
Query: 376 AEGIINA 396
AEGII A
Sbjct: 626 AEGIIMA 632
>UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Deinococcus radiodurans
Length = 386
Score = 132 bits (319), Expect = 2e-30
Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALD-GNIGCMVNG 186
G LD KF DD A +R K+L R+ + E P E+EA+ Y Y+ LD GN+G + NG
Sbjct: 200 GTPIALDTKFEIDDNAMYRHKDLAHYRELSAEHPLEVEASDYGFAYVKLDDGNVGVLGNG 259
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AG+ M T+D++ G PANFLD+GGGA V A K++ DP V AI +NIFGGI R
Sbjct: 260 AGIVMTTLDVVNRAGAKPANFLDIGGGAKADVVYNAVKLVSKDPDVKAIFINIFGGITRA 319
Query: 367 DVXAEGIINA 396
D A+G+I A
Sbjct: 320 DEVAKGVIRA 329
>UniRef50_A2QQL9 Cluster: Contig An08c0100, complete genome; n=5;
cellular organisms|Rep: Contig An08c0100, complete
genome - Aspergillus niger
Length = 325
Score = 132 bits (318), Expect = 3e-30
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXA---EFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDG--NIG 171
T F DA+F FDD A RQ+++ LR+ +E P+E+EA K + Y+ L+G +IG
Sbjct: 138 TSAFEVRDARFAFDDAAFRSSGRQEDVQQLRNPAEEVPEEVEAEKDGIVYVKLEGKGSIG 197
Query: 172 CMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFG 351
+VNGAGLAM T+D + ++GG ANFLD GG AT + V +F+II SD +V AI VNIFG
Sbjct: 198 TLVNGAGLAMNTVDALTIHGGHCANFLDTGGKATAETVKSSFRIITSDRRVKAIFVNIFG 257
Query: 352 GIMRCDVXAEGIINA 396
G+ RCD+ AEGII A
Sbjct: 258 GLTRCDMIAEGIILA 272
>UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n=3;
Archaeoglobus fulgidus|Rep: Succinyl-CoA synthetase beta
chain 1 - Archaeoglobus fulgidus
Length = 382
Score = 130 bits (313), Expect = 1e-29
Identities = 65/128 (50%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Frame = +1
Query: 16 FFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGL 195
F DA+ DD A +R EL LR+ T+EDP E EA +NY+ L GN+G + NGAGL
Sbjct: 200 FLAADARLNTDDNALYRHPELAELREATEEDPLEREARLKGINYVHLGGNVGVIANGAGL 259
Query: 196 AMATMDIIKLYGGDPANFLDVGGG-ATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDV 372
AMATMDII L GG PANFLD GGG A + +L DP V + +NI+ I RC+
Sbjct: 260 AMATMDIINLMGGKPANFLDTGGGLADPVKMKNCLLHVLKDPNVRVVFINIYAEITRCEK 319
Query: 373 XAEGIINA 396
AEGII A
Sbjct: 320 VAEGIILA 327
>UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit,
putative; n=1; Babesia bovis|Rep: Succinly CoA-ligase
beta subunit, putative - Babesia bovis
Length = 436
Score = 129 bits (311), Expect = 2e-29
Identities = 63/123 (51%), Positives = 83/123 (67%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMAT 207
D+K DD A+FRQKE+F E+ E A + LNYI+L GNI C+VNGAGLAMAT
Sbjct: 262 DSKVIIDDNADFRQKEIFESVPPA-ENELEARANEVGLNYISLGGNIACIVNGAGLAMAT 320
Query: 208 MDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGI 387
+D++ +GG P+NFLDVGG AT +++A I+ SD K A+LVNI GGI++CD A
Sbjct: 321 LDLLTHHGGSPSNFLDVGGNATGHMLNQALDIVASDAKAKALLVNIVGGIVQCDQFALSF 380
Query: 388 INA 396
+ A
Sbjct: 381 VEA 383
>UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2;
Candidatus Blochmannia|Rep: Succinyl-CoA synthetase beta
chain - Blochmannia floridanus
Length = 399
Score = 127 bits (307), Expect = 7e-29
Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
Frame = +1
Query: 22 CLDAKFRFDDXAEFRQKELFSL--RDTTQEDPKEIEA--AKYN-LNYIALDGNIGCMVNG 186
CLDAK D A FRQ +L +L ++ D + +KY +NY+ALDGNIG +VNG
Sbjct: 216 CLDAKVSIDRNALFRQLDLVNLFLKNNNPNDNSHLPKLYSKYGGVNYVALDGNIGLLVNG 275
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGLAMATMD+IKL+GG+PANFLD+GG ++++EA K + + I +NIFGGI+ C
Sbjct: 276 AGLAMATMDLIKLFGGNPANFLDIGGDTNQESITEALKKLFKQESIKVIFINIFGGIVCC 335
Query: 367 DVXAEGIIN 393
+ A+ II+
Sbjct: 336 KLIADSIIH 344
>UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8;
Thermoprotei|Rep: Succinyl-CoA synthetase beta chain -
Pyrobaculum aerophilum
Length = 382
Score = 122 bits (295), Expect = 2e-27
Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEA--AKYNLNYIALDGNIGCMVN 183
G+ LDA+ DD A F+ EL + D E EA K +Y+ LDG++G + N
Sbjct: 201 GEVIPLDARVIVDDNALFKHPELEKALEEDPRDVTEFEAYAKKIGFHYVELDGDVGIIGN 260
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAGL MATMD++ +GG PANFLD+GGGA+ + V EA K++L P+V I VNIFGGI R
Sbjct: 261 GAGLTMATMDLVYHFGGRPANFLDIGGGASREVVKEAVKVLLHHPRVKVIFVNIFGGITR 320
Query: 364 CDVXAEGIINA 396
D A GI A
Sbjct: 321 ADEVALGIKEA 331
>UniRef50_UPI000023F608 Cluster: hypothetical protein FG07900.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07900.1 - Gibberella zeae PH-1
Length = 577
Score = 121 bits (291), Expect = 6e-27
Identities = 59/124 (47%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELF-SLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMA 204
+++F FDD A+ + + ++ L + ED E+ A + L Y+ ++G+IG +VNGAGLAMA
Sbjct: 145 NSRFCFDDDAKKKARNVYLPLWEPLMEDEAELYAETFGLVYVKMNGDIGTVVNGAGLAMA 204
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEG 384
T D I ++GG ANFLD GG AT + AFKI++ D +V I VNI+GGI RCD+ AE
Sbjct: 205 TNDAICVHGGKSANFLDAGGQATNDTMKRAFKIVMDDRRVKIIFVNIYGGITRCDMIAES 264
Query: 385 IINA 396
II+A
Sbjct: 265 IIDA 268
>UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Halobacteriaceae|Rep: Succinyl-CoA synthetase beta chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 382
Score = 121 bits (291), Expect = 6e-27
Identities = 56/123 (45%), Positives = 77/123 (62%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMAT 207
DA + D+ A FRQ + + ED E +A +Y +Y+ LDGN G + NGAGL M T
Sbjct: 205 DAVMKLDEDALFRQPAFADMEEDAAEDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTT 264
Query: 208 MDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGI 387
+D++ YGG PANFLD+GGGA V+ A ++ SD V +++ NIFGGI R D A+GI
Sbjct: 265 LDLVDYYGGQPANFLDIGGGAKADRVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGI 324
Query: 388 INA 396
+A
Sbjct: 325 NSA 327
>UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Caldivirga maquilingensis IC-167|Rep: Succinyl-CoA
synthetase, beta subunit - Caldivirga maquilingensis
IC-167
Length = 377
Score = 120 bits (289), Expect = 1e-26
Identities = 57/129 (44%), Positives = 82/129 (63%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G F LD K DD A +R ++ S+ + +E+EA KY +Y+ L G +G + NGA
Sbjct: 197 GNFVALDVKIMIDDNALYRHGDI-SVEEEGDLTREELEARKYGFHYVELPGYVGVVGNGA 255
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL MATMD++K + G+PA+FLDVGGGA+ V A ++L D ++ I++NIFGGI R D
Sbjct: 256 GLTMATMDLVKEFKGEPADFLDVGGGASRDIVKAALSLLLKDERIKGIVLNIFGGITRGD 315
Query: 370 VXAEGIINA 396
A G++ A
Sbjct: 316 EVAYGVVEA 324
>UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Succinyl-CoA
synthetase, beta subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 383
Score = 119 bits (287), Expect = 2e-26
Identities = 55/129 (42%), Positives = 81/129 (62%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LDAK D+ + +R +E+ RD DP+E A + L Y+ LDG++G + NGA
Sbjct: 199 GEVVALDAKVTVDNSSLYRHQEIAGWRDVEAADPQEHRAQEVGLQYVKLDGDVGILGNGA 258
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL M+T+D++ GG PANF DVGGGA + ++ A +I+ S+ V ++ NIFGGI R D
Sbjct: 259 GLVMSTLDVVAQAGGRPANFCDVGGGADAEKIATALEIVASNENVRSVFFNIFGGITRGD 318
Query: 370 VXAEGIINA 396
A G++ A
Sbjct: 319 EVARGLLAA 327
>UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=47;
Actinobacteria (class)|Rep: Succinyl-CoA synthetase beta
chain - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 398
Score = 119 bits (286), Expect = 2e-26
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 6/135 (4%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQE-DPKEIEAAKYNLNYIALDGNIGCMVNG 186
G LD K DD A+FR +L ++ D E++A K +LNY+ LDG++G + NG
Sbjct: 199 GDVIALDGKITLDDNADFRHDNRGALAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNG 258
Query: 187 AGLAMATMDII----KLYGGD-PANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFG 351
AGL M+T+DI+ + +GG PANFLD+GGGA+ ++++ +IL D +V ++ VN+FG
Sbjct: 259 AGLVMSTLDIVAAAGERHGGQRPANFLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFG 318
Query: 352 GIMRCDVXAEGIINA 396
GI CDV A+GI+ A
Sbjct: 319 GITACDVVAKGIVGA 333
>UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Psychroflexus torquis ATCC 700755|Rep: Succinyl-CoA
synthetase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 247
Score = 117 bits (282), Expect = 7e-26
Identities = 54/124 (43%), Positives = 80/124 (64%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMA 204
LD+K D A +R +E + E A LN+I LDG++G + NGAGL M+
Sbjct: 72 LDSKVSLDMNAIYRHEEFIKYEEEIPIPESEKFAKSKGLNFIKLDGSVGIIGNGAGLVMS 131
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEG 384
T+D++ +GG ANF D+GGGA + V+ A +++ S+ +VT++L+NIFGGI RCD+ AEG
Sbjct: 132 TLDVVAEHGGKAANFCDIGGGAKAETVTAALEVLESEKEVTSVLINIFGGITRCDLVAEG 191
Query: 385 IINA 396
I+ A
Sbjct: 192 IVEA 195
>UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Methanomicrobiales|Rep: Succinyl-CoA synthetase,
beta subunit - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 361
Score = 115 bits (276), Expect = 4e-25
Identities = 62/123 (50%), Positives = 77/123 (62%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMAT 207
D K DD + RQ + RD T P+E EA K+ +Y+ L+GNIG + NGAGL MAT
Sbjct: 198 DGKIILDDNSLIRQG-ISENRDLT---PREAEAEKHGFSYVELEGNIGVIGNGAGLTMAT 253
Query: 208 MDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGI 387
+DII Y G ANFLDVGGGA V A +++ S P V I+VN+ GGI RCD A+GI
Sbjct: 254 LDIISHYHGKAANFLDVGGGAASDRVMYAVQLVASMPGVKVIVVNLLGGITRCDEVAKGI 313
Query: 388 INA 396
I A
Sbjct: 314 IEA 316
>UniRef50_Q5DG82 Cluster: SJCHGC06370 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06370 protein - Schistosoma
japonicum (Blood fluke)
Length = 180
Score = 114 bits (274), Expect = 7e-25
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Frame = +1
Query: 115 EIEAAKYNLNYIAL-DGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSE 291
E +AA LNYI L DGNIGC+VNGAGLAMATMD+I + G PANFLD+GG T V +
Sbjct: 22 EADAAHNGLNYIGLNDGNIGCIVNGAGLAMATMDLIHYHHGKPANFLDLGGSVTRSQVEK 81
Query: 292 AFKIILSDPKVTAILVNIFGGIMRCDVXAEGIINA 396
AF ++ + ILVNIFGGI+ C + AEG+++A
Sbjct: 82 AFCLLARHSSINCILVNIFGGIVNCKIIAEGLLSA 116
>UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 580
Score = 114 bits (274), Expect = 7e-25
Identities = 63/127 (49%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Frame = +1
Query: 31 AKFRFDDXA---EFRQKELFSLRDTTQEDPKEIEAAKYNLNYIAL--DGNIGCMVNGAGL 195
A F FDD A R E+ SL +DP E EA K+ + YI L DGNIG +VNGAGL
Sbjct: 399 ANFGFDDAAFKSANRHSEIHSLPRADIQDPAETEAQKHGIVYIKLAGDGNIGTLVNGAGL 458
Query: 196 AMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVX 375
AM T+D + GG ANFLD GG AT + V ++F++IL D +V + VNIFGG+ D+
Sbjct: 459 AMNTVDALADAGGKAANFLDTGGKATAETVKKSFEVILRDERVKVVFVNIFGGLTLGDMI 518
Query: 376 AEGIINA 396
AEGI+ A
Sbjct: 519 AEGILLA 525
>UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n=6;
Thermoplasmatales|Rep: Succinyl-CoA synthetase beta
subunit - Thermoplasma volcanium
Length = 384
Score = 110 bits (265), Expect = 8e-24
Identities = 57/129 (44%), Positives = 81/129 (62%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ DAK D A +R +E FS++D ++ P E++A ++ LDG+IG + NGA
Sbjct: 211 GKLIAADAKVVIDSDAIYRHRE-FSIQDP-EKTPLELKAEGKGYAFVELDGDIGVIANGA 268
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL MAT+D + L+ G P NFLD+GG V AF ++L + K AILVNIFGG+ +CD
Sbjct: 269 GLTMATLDALLLHKGKPRNFLDLGGTDNVDIVINAFDLVL-EAKPKAILVNIFGGVTKCD 327
Query: 370 VXAEGIINA 396
A+GI+ A
Sbjct: 328 TVAQGIVEA 336
>UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bifidobacterium|Rep: Succinyl-CoA synthetase beta chain
- Bifidobacterium longum
Length = 400
Score = 109 bits (262), Expect = 2e-23
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 6/136 (4%)
Frame = +1
Query: 7 TGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
T Q LDAK DD A FR D DP E A ++ L+Y+ L G +G + NG
Sbjct: 204 TKQLSALDAKISLDDNASFRHDGWARFVDPIVPDPFEQRAREHGLHYVHLHGEVGVIGNG 263
Query: 187 AGLAMATMDIIKLYGGD------PANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIF 348
AGL M+++D + G + PANFLD+GGGA+ ++E+ +I+LSDP+V ++ +N++
Sbjct: 264 AGLVMSSLDAVSGAGEEQGTNIKPANFLDIGGGASAAVMAESLEIVLSDPQVESVFINVY 323
Query: 349 GGIMRCDVXAEGIINA 396
GGI C A GI+ A
Sbjct: 324 GGITSCVEVANGILEA 339
>UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n=1;
unknown|Rep: UPI00015B9071 UniRef100 entry - unknown
Length = 384
Score = 109 bits (261), Expect = 3e-23
Identities = 56/129 (43%), Positives = 76/129 (58%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LD K DD A FRQ +L + E E A L +I LDG++G + NGA
Sbjct: 198 GRVVALDCKLTLDDSAAFRQGDLAAEAAEEPMTELEREGAAQGLKFIQLDGDVGVLANGA 257
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL M TMD+I GG PANFL++GG A ++ A K++LS+P V +++VN G R D
Sbjct: 258 GLTMTTMDVISHCGGRPANFLEIGGEAYTKS-EAALKLVLSNPGVKSLVVNFCGAFARTD 316
Query: 370 VXAEGIINA 396
V AEG++ A
Sbjct: 317 VMAEGVVTA 325
>UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n=4;
Peptococcaceae|Rep: Succinyl-CoA synthetase beta subunit
- Pelotomaculum thermopropionicum
Length = 369
Score = 107 bits (257), Expect = 8e-23
Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAK-YNLNYIALDGNIGCMVNGAGLAMA 204
DAK DD A FR K+L + D T + +AAK L+Y+ LDG+I M NGAG+ M
Sbjct: 201 DAKVTIDDDALFRHKDLPYVEDRTATE----KAAKDLGLSYVELDGDIAVMANGAGITMT 256
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILS-DPKVTAILVNIFGGIMRCDVXAE 381
T+D ++ YGG PANFLD GGG + ++A +++L+ +PKV I VNIFGGI RCD A
Sbjct: 257 TLDTLQYYGGRPANFLDCGGGTGREVTAKALELLLTKNPKV--IFVNIFGGITRCDDVAN 314
Query: 382 GI 387
I
Sbjct: 315 AI 316
>UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Symbiobacterium thermophilum|Rep: Succinyl-CoA
synthetase beta subunit - Symbiobacterium thermophilum
Length = 373
Score = 107 bits (256), Expect = 1e-22
Identities = 55/121 (45%), Positives = 76/121 (62%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMAT 207
D +F +D A FR E + + T+ + K++ A L ++ LDG+I M NGAG+AM T
Sbjct: 202 DGRFNVEDDALFRHPEFPRVEEGTELE-KKVRAI--GLAFVQLDGDIAVMANGAGMAMGT 258
Query: 208 MDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGI 387
+D + YGG PANFLD GGG+ + ++AF +L K AI VNIFGGI RCD+ AE I
Sbjct: 259 LDTLAYYGGRPANFLDAGGGSGVEPTAQAFDALLG-TKPKAIFVNIFGGITRCDLVAEAI 317
Query: 388 I 390
+
Sbjct: 318 V 318
>UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Sulfolobaceae|Rep: Succinyl-CoA synthetase beta chain -
Sulfolobus acidocaldarius
Length = 337
Score = 106 bits (255), Expect = 1e-22
Identities = 57/129 (44%), Positives = 80/129 (62%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ LD+K +D A FR ++L + K E+ NY+ LDG++G + NGA
Sbjct: 174 GKIIALDSKVILEDNALFRHEDLIQ-----KLGRKPAES-----NYVELDGDVGIIGNGA 223
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL MATMD++K+ GG+PA+F D+GGGA + V EA I S+ KV I++NI+ GI RCD
Sbjct: 224 GLTMATMDMVKIMGGNPADFFDIGGGAGRERVKEAIINIASNKKVKKIVMNIYSGITRCD 283
Query: 370 VXAEGIINA 396
A GI+ A
Sbjct: 284 EVAMGIVEA 292
>UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein
NCU09810.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU09810.1 - Neurospora crassa
Length = 646
Score = 105 bits (251), Expect = 4e-22
Identities = 62/129 (48%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Frame = +1
Query: 31 AKFRFDDXAEFRQ----KELFSLRDTTQEDPKEIEAAKYNLNYIAL---DGNIGCMVNGA 189
A+F FD A FR ++ ++ ++P E +A + + YI L D IG +VNGA
Sbjct: 467 ARFAFDQ-ATFRNGTPPDKIKAMYVCATDEPAEAKAERSGIVYIKLPGEDATIGTLVNGA 525
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLAM T+D + GG ANFLD GG AT Q V E+F IIL DP+V I VNIFGG+ R D
Sbjct: 526 GLAMNTVDALADAGGKAANFLDTGGKATSQTVKESFMIILQDPRVRVIFVNIFGGLTRGD 585
Query: 370 VXAEGIINA 396
V A GII A
Sbjct: 586 VIAHGIIVA 594
>UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1;
Rhodopseudomonas palustris BisA53|Rep: Succinate--CoA
ligase - Rhodopseudomonas palustris (strain BisA53)
Length = 375
Score = 103 bits (247), Expect = 1e-21
Identities = 52/124 (41%), Positives = 73/124 (58%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMA 204
LDAK D+ A FRQ L + E A+ L ++ DGN+G + NGAGL M
Sbjct: 203 LDAKVTLDEAAAFRQPTLAAAAAPEPATELERRGAEAGLKFLQFDGNVGVLANGAGLTMT 262
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEG 384
TMD+I+ +GG PANFL++GG A +A A ++L+ P V +++VN G R DV AEG
Sbjct: 263 TMDVIRHFGGRPANFLEIGGEAYTKA-EIALGLVLAHPGVKSLVVNFCGAFARTDVMAEG 321
Query: 385 IINA 396
++ A
Sbjct: 322 VVRA 325
>UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
beta subunit - Cenarchaeum symbiosum
Length = 365
Score = 103 bits (246), Expect = 2e-21
Identities = 54/129 (41%), Positives = 77/129 (59%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G LD K DD A FR +EL R++++ + + A K + + LDGNI + NGA
Sbjct: 190 GTLLALDGKVMTDDNAAFRHQELEKYRESSELEER---AQKSGFSLVELDGNIAVVGNGA 246
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL M+T+D++ GG PA FLDVGGGAT ++V EA +I +V ILVN++GGI++
Sbjct: 247 GLVMSTLDMLSDSGGRPACFLDVGGGATTESVYEALTLINKMDRVKGILVNLYGGIVKTT 306
Query: 370 VXAEGIINA 396
A + A
Sbjct: 307 TIASAFLKA 315
>UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Succinate--CoA ligase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 368
Score = 101 bits (242), Expect = 5e-21
Identities = 54/124 (43%), Positives = 77/124 (62%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMA 204
LD KF DD + FR EL ++ ++ E +A K + + LDG+I + NGAGL M+
Sbjct: 198 LDGKFVTDDNSNFRHPELEKYQEKSEI---EEQAEKSGFSLVELDGDIAVVGNGAGLVMS 254
Query: 205 TMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEG 384
T+D++ GG PA FLDVGGGAT ++V EA +I +V ILVN++GGI++ V AE
Sbjct: 255 TLDMLSDNGGKPACFLDVGGGATTESVYEALTLISKLDRVKGILVNLYGGIVKTTVVAEA 314
Query: 385 IINA 396
+ A
Sbjct: 315 FLKA 318
>UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Roseovarius|Rep: Succinyl-CoA synthetase beta subunit -
Roseovarius sp. 217
Length = 391
Score = 100 bits (240), Expect = 9e-21
Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G++ +DAK D A FR+ E S+ E+ A K+N+N + L+GNIG + NGA
Sbjct: 206 GRWMAVDAKVAIDPNAGFRRPEFASMVADRPAPADELAAQKHNINLVRLEGNIGVVANGA 265
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIM-RC 366
GL +AT D+I GG ANF+D+ A+ V+ +I+L+D +VTAIL+ I GG M
Sbjct: 266 GLGLATNDLIMDAGGKAANFMDIRTTASSMDVARGVEILLADDRVTAILLTIHGGGMTSA 325
Query: 367 DVXAEGI 387
D AEG+
Sbjct: 326 DTVAEGV 332
>UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Archaea|Rep: Succinyl-CoA synthetase beta subunit -
Methanopyrus kandleri
Length = 359
Score = 97.1 bits (231), Expect = 1e-19
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +1
Query: 145 YIALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKV 324
++ LDG+IG + NGAGL MAT+D++K GG PANFLDVGGGA + A + +++ V
Sbjct: 229 FVELDGDIGIIANGAGLTMATIDLVKDLGGKPANFLDVGGGAYPTLIRRAI-LTVAELDV 287
Query: 325 TAILVNIFGGIMRCDVXAEGIINA 396
IL+NIFGGI RCD AEGI+ A
Sbjct: 288 KVILLNIFGGITRCDEVAEGIVQA 311
>UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 390
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALD--GNIGCMVN 183
G+ DAK DD A FR E+ + +P E A N+ Y++++ G+IG +
Sbjct: 199 GKIIAADAKLILDDEASFRS-EIIRNASRPEINPLEKRAGDLNVTYVSIEEGGDIGIIAG 257
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAGL+MATMD + G PA F+D+GGG + + + E+ ++ P + I++N+FGGI
Sbjct: 258 GAGLSMATMDAVYGIGAKPAAFIDLGGGISRERMKESLLLMTETPNLRGIIINVFGGINN 317
Query: 364 CDVXAEGI 387
C A G+
Sbjct: 318 CLTMAAGL 325
>UniRef50_A1FZP5 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Stenotrophomonas maltophilia R551-3
Length = 477
Score = 93.1 bits (221), Expect = 2e-18
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = -3
Query: 395 ALMIPSAXTSHLIIPPKMFTKIAVTFGSERMILNASETAWXVAPPPTSKKLAGSPP*SLI 216
A M+PSA S +PPKM TK+ T +R+ L AS T +APPPTS+K AGSPP SL+
Sbjct: 395 AAMMPSAIMSQRTMPPKMLTKMPSTLSEDRISLKASMTRCLLAPPPTSRKFAGSPPLSLM 454
Query: 215 ISIVAIANPAPLTIHPMFPS 156
S+VA+A PAPLT+ PM PS
Sbjct: 455 TSMVAMARPAPLTMQPMLPS 474
>UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho
melanesiensis BI429|Rep: Succinate--CoA ligase -
Thermosipho melanesiensis BI429
Length = 338
Score = 92.7 bits (220), Expect = 2e-18
Identities = 51/129 (39%), Positives = 71/129 (55%)
Frame = +1
Query: 4 LTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVN 183
L G LDA DD + FRQK TQ +++ L+G+IG +
Sbjct: 171 LNGDLIALDAVLHLDDNSIFRQKWAKQFSSETQP-----------FHFVKLNGDIGIIGC 219
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAG+ MATMD + YGG PANFLD+GGGA + + A + L + + I++NIFGGI +
Sbjct: 220 GAGIVMATMDAVTFYGGKPANFLDLGGGADTKTTTLALE-YLKNLSINKIIMNIFGGITK 278
Query: 364 CDVXAEGII 390
CD A+ I+
Sbjct: 279 CDEIAQAIV 287
>UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Euryarchaeota|Rep: Succinyl-CoA synthetase beta chain -
Methanococcus jannaschii
Length = 364
Score = 92.3 bits (219), Expect = 3e-18
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQK-ELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNG 186
G + DA DD A FR E F E+ K E K Y+ LDG++ + NG
Sbjct: 197 GNVYAADAVLHLDDDAAFRHNYEEF-------EEYKNKE--KLPFAYVELDGDVAVIGNG 247
Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
AGL +A+MDII G PA FLD+GGGA + V A + +L + V I +NI GGI RC
Sbjct: 248 AGLTLASMDIINNLGRKPACFLDIGGGADAETVKLALRKVLENKNVKGIFINILGGITRC 307
Query: 367 DVXAEGII 390
D A+GI+
Sbjct: 308 DEVAKGIV 315
>UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 372
Score = 91.1 bits (216), Expect = 7e-18
Identities = 54/129 (41%), Positives = 71/129 (55%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G D KF DD A ++Q RD + D E EAA + YIA +G+IG MV GA
Sbjct: 194 GTMAAADGKFNLDDNALYKQNRFSLTRDHYKSD-FEYEAALDGIPYIAFEGDIGMMVAGA 252
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GLA +D+I YGG AN+L+ GG +A + K++L K IL+ FG I R D
Sbjct: 253 GLANVVLDLIHYYGGTVANYLEFGGPNYHKA-QQCMKMMLK-AKPKCILIATFGTIARAD 310
Query: 370 VXAEGIINA 396
V A+GI+ A
Sbjct: 311 VMAQGIVEA 319
>UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), beta
chain; n=3; Methanococcus maripaludis|Rep: Succinate-CoA
ligase (ADP-forming), beta chain - Methanococcus
maripaludis
Length = 362
Score = 91.1 bits (216), Expect = 7e-18
Identities = 51/128 (39%), Positives = 70/128 (54%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGA 189
G+ DA DD A FR + +E K+ K Y+ LDG+I + NGA
Sbjct: 193 GKIIAADAVLNVDDDAYFRHNY-----EKFEEFNKQ---EKSEFAYVELDGDIAVIGNGA 244
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
GL +A+MDI+K +GG+PA FLDVGGG+ + V +A S V +NI GGI RCD
Sbjct: 245 GLTLASMDIVKEFGGNPACFLDVGGGSNRETVKKALLKATSRKNVKGAFINILGGITRCD 304
Query: 370 VXAEGIIN 393
+ GI++
Sbjct: 305 EVSMGIVD 312
>UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family;
n=1; Thermofilum pendens Hrk 5|Rep: Transcriptional
regulator, Fis family - Thermofilum pendens (strain Hrk
5)
Length = 372
Score = 89.0 bits (211), Expect = 3e-17
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSL--RDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLA 198
LD K DD A R+ L + R ++ D + A + + + LDG+ + NGAGL
Sbjct: 201 LDRKGVIDDDAS-RKSSLTGIFARYFSELDELSLSAFQKGFSVVKLDGDTAVVGNGAGLT 259
Query: 199 MATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVXA 378
MAT+D + G P FLD+GGGA + V EA ++L ++ IL+NI GGI RCD A
Sbjct: 260 MATLDAVLEAGARPGLFLDLGGGADAERVREALLLVLKQQNISKILLNILGGITRCDEVA 319
Query: 379 EGIINA 396
G++ A
Sbjct: 320 RGVVQA 325
>UniRef50_Q4PDA9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 400
Score = 88.2 bits (209), Expect = 5e-17
Identities = 43/80 (53%), Positives = 53/80 (66%)
Frame = +1
Query: 157 DGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAIL 336
+GNIGC GAG AMATMD + + GG PANFLD GGGA A + + DP V AI
Sbjct: 266 EGNIGCFGYGAGNAMATMDGLNVAGGRPANFLDGGGGANRTNAKLAVETLNRDPAVKAIF 325
Query: 337 VNIFGGIMRCDVXAEGIINA 396
+N FGGI R D+ ++GII+A
Sbjct: 326 INTFGGITRTDIVSQGIIDA 345
>UniRef50_Q05FP0 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Carsonella ruddii PV|Rep: Succinyl-CoA
synthetase beta subunit - Carsonella ruddii (strain PV)
Length = 345
Score = 85.8 bits (203), Expect = 3e-16
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +1
Query: 139 LNYIALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDP 318
+NYI L GNI C+VNGAGLA+ T+DI+ ANF+D+ G T ++ K+IL D
Sbjct: 212 INYIKLKGNICCIVNGAGLALKTLDILSFNNLKCANFIDLSGSITEVNINNLLKVILIDK 271
Query: 319 KVTAILVNIFGGIMRCDVXAEGIIN 393
K+ +L+NIFGGI+ C+ G +N
Sbjct: 272 KLNFLLINIFGGIVSCEKILIGFLN 296
>UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 380
Score = 81.0 bits (191), Expect = 8e-15
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQ--EDPKEIEAAKYNLNYIALDGNIGCMVN 183
G +DA DD A R + F L D + E+P E + + Y+ LDG+IG + +
Sbjct: 200 GGLIAVDAVLEVDDSAISRVR--FPLPDRVERIENPLERRGREIGVTYVDLDGDIGLISS 257
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR 363
GAGL MA+ DII PANFL+ GGG T + + ++I+ P + A+ +N++GGI
Sbjct: 258 GAGLGMASTDIIG-ERMKPANFLETGGGITADLLYKCMELIMMKPGLRAVFINVYGGINP 316
Query: 364 CDVXAEGII 390
A+G++
Sbjct: 317 IHEGAKGVV 325
>UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Succinate--CoA
ligase - Fervidobacterium nodosum Rt17-B1
Length = 355
Score = 77.0 bits (181), Expect = 1e-13
Identities = 49/125 (39%), Positives = 66/125 (52%)
Frame = +1
Query: 16 FFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGL 195
+ LDA DD A FRQ + + D + L G+ G + GAG+
Sbjct: 184 YVMLDAVMHVDDNALFRQSWAMEQMNEREND------------MVLLGGSYGVIGCGAGI 231
Query: 196 AMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCDVX 375
MAT+D++K +G +PANF DVGGGAT + V EA K + K I++NIFGGI C
Sbjct: 232 VMATIDMLKEFGFEPANFYDVGGGATRENVLEALKKVSRISK--KIVLNIFGGITDCFQV 289
Query: 376 AEGII 390
AE I+
Sbjct: 290 AEAIV 294
>UniRef50_Q1VJG8 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 145
Score = 75.4 bits (177), Expect = 4e-13
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = -3
Query: 395 ALMIPSAXTSHLIIPPKMFTKIAVTFGSERMILNASETAWXVAPPPTSKKLAGSPP*SLI 216
A IPSA SHL+IPPK+ K VT S+ A+ T +APPP S+KLA PP S
Sbjct: 35 ASTIPSATKSHLVIPPKILIKTLVTSFSDSKTSKAAVTVSALAPPPISQKLAAFPPCSAT 94
Query: 215 ISIVAIANPAPLTIHPMFPSRAM*FK 138
S V I +PAPL I P PS + FK
Sbjct: 95 TSKVDITSPAPLPIIPTLPSSLIKFK 120
>UniRef50_A4M0C4 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 402
Score = 72.9 bits (171), Expect = 2e-12
Identities = 40/131 (30%), Positives = 68/131 (51%)
Frame = -2
Query: 393 INDTFCXDVAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDY 214
++D DVA H+ ++V Q+ H+ V E+DFE L D+L + +QEV G++PV D
Sbjct: 30 LDDAGGDDVALHDAAEDVDQDPFHVTVGEDDFEGLGDALDGGPAPYVQEVGGISPVVLDD 89
Query: 213 IHRSHS*SSTVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKL 34
+H H + VN V + +GVFL V+ L ++E +V+++L
Sbjct: 90 VHGGHGEACAVNEAADVAGKGDVGEVVLRRLDLVGVFLVEVAHVAYLQVAEERIVVEAEL 149
Query: 33 GIQTEELSCQG 1
G++ +E +G
Sbjct: 150 GVERQEFPLRG 160
>UniRef50_A5P1R6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 463
Score = 67.3 bits (157), Expect = 1e-10
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -3
Query: 395 ALMIPSAXTSHLIIPPKMFTKIAVTFGSERMILNASETAWXVAPPPTSKKLAGSPP 228
A + P A TSH +IPPKM T+I TFGS MIL A+ T APPPTS+K AGS P
Sbjct: 408 AAITPLAITSHFMIPPKMLTRIPFTFGSAVMILKAAVTFSSEAPPPTSRKFAGSSP 463
>UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase beta subunit - Aquifex
aeolicus
Length = 436
Score = 59.3 bits (137), Expect = 3e-08
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Frame = +1
Query: 25 LDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLN----------YIALDGNIGC 174
LDA + DD A +++ +R + P E E A ++ Y+ LDG+I
Sbjct: 208 LDAVVKIDDDASIPPAKIYGVRTALRRPPTEREIAAAEIDKDDHRGKAGSYVELDGDIAM 267
Query: 175 MVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGG 354
M G G + T++ G PAN D+GG + + + +IILS P + A+L I GG
Sbjct: 268 MTFGGGGSTVTIETCYELGLKPANLTDIGGNPPAEKMYKITRIILSKPGIRAVL--IAGG 325
Query: 355 I---MRCDV-XAEGIINA 396
R DV EG+ NA
Sbjct: 326 TANNTRIDVTLGEGVANA 343
>UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05557 protein - Schistosoma
japonicum (Blood fluke)
Length = 177
Score = 57.6 bits (133), Expect = 8e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 4 LTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYI 150
+ G C+D K FDD A FRQKE F+ RD +QED ++++A LNYI
Sbjct: 128 INGHVICMDCKMNFDDNAAFRQKENFAQRDWSQEDERDVKATNAGLNYI 176
>UniRef50_A0VLY8 Cluster: Putative uncharacterized protein; n=2;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 474
Score = 52.8 bits (121), Expect = 2e-06
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = -2
Query: 369 VAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDYIHRSHS*S 190
+ H+ ++VH+++ LRV +D ERL L + ++EV + VE D +H H +
Sbjct: 17 ITAHDAAEDVHEDAFDLRVRGDDLERLGHLLLGRTAAHVEEVGRLRTVELDDVHGRHGEA 76
Query: 189 STVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKLGIQTEELS 10
V+H VF LG+ L V+Q + ++ VKS L +Q +++
Sbjct: 77 RAVHHAADLAVEGDVVQVVFRGGELLGILLGLVAQLGDVRVAIDRVAVKSHLRVQAFQIA 136
Query: 9 CQG 1
G
Sbjct: 137 TVG 139
>UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb
CG10622-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to Sucb CG10622-PA, isoform A - Apis
mellifera
Length = 370
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +1
Query: 13 QFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNI 168
Q +DAK FDD A+FRQ++LF+L + +DP+E +A +++LN ++LD +
Sbjct: 244 QVIAVDAKISFDDNAQFRQQDLFALENNDTKDPREADALRFDLN-LSLDPKV 294
Score = 41.5 bits (93), Expect = 0.006
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 295 FKIILS-DPKVTAILVNIFGGIMRCDVXAEGIINA 396
F + LS DPKV ILVN+FGGI+ C A+GII A
Sbjct: 284 FDLNLSLDPKVKVILVNVFGGIVNCATIAKGIIAA 318
>UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2;
Oscillatoriales|Rep: Succinate--CoA ligase -
Trichodesmium erythraeum (strain IMS101)
Length = 405
Score = 52.0 bits (119), Expect = 4e-06
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Frame = +1
Query: 49 DXAEFRQKELFSLRDTTQEDPKEIEAAK-------YNLNYIALDGNIGCMVNGAGLAMAT 207
D E +QKE+ + D++ I A Y L + L GNIG + NG GL MAT
Sbjct: 223 DNYEIKQKEVKEIEDSSLLVFNNINAVSNRKIIPDYRLKFKELQGNIGILCNGKGLTMAT 282
Query: 208 MDIIKLYGGDPANFLDVGGG-------ATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
+D++ G PANFL++ G + + A ++ + +L+N+ G +
Sbjct: 283 VDMVIQAQGKPANFLNIKLGDYLEVKNSLRSQMFTALDLVSQRDNIKVVLINVIGIVETS 342
Query: 367 D 369
D
Sbjct: 343 D 343
>UniRef50_A5P1R4 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 449
Score = 51.2 bits (117), Expect = 7e-06
Identities = 34/123 (27%), Positives = 56/123 (45%)
Frame = -2
Query: 369 VAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDYIHRSHS*S 190
VA H+ ++V ++ H+RV +D E R L A+ D++EV + VE D + R H +
Sbjct: 71 VALHDPAEDVDEDPLHVRVGRDDLEGRRHLLLGGAAADVEEVRRLLAVELDDVERRHGEA 130
Query: 189 STVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKLGIQTEELS 10
V+H V + L V L V+Q L ++ V+ LG+Q ++
Sbjct: 131 GAVDHAADRALERDVGEVVLRGLDLLLVLLGRVAQLHDLRVAVEGVRVEGDLGVQALQVP 190
Query: 9 CQG 1
G
Sbjct: 191 VLG 193
>UniRef50_Q8FMQ2 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium efficiens|Rep: Putative uncharacterized
protein - Corynebacterium efficiens
Length = 153
Score = 48.0 bits (109), Expect = 7e-05
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = -3
Query: 386 IPSAXTSHLIIPPKMFTKIAVTFGSERMILNASETAWXVAPPPTSKKLAGS-P----P*S 222
+P A +S ++PPK T T GS + + + APPP S+K AG+ P P S
Sbjct: 69 MPLATSSQAVMPPKTLTSTLRTCGSHIITSSPATILSEEAPPPISRKFAGACPPCLWPAS 128
Query: 221 LIISIVAIANPAPLTIHPMFPS 156
+S V I PAPL + P PS
Sbjct: 129 ATMSSVDITRPAPLPMIPTVPS 150
>UniRef50_Q08WT9 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 709
Score = 47.6 bits (108), Expect = 9e-05
Identities = 28/122 (22%), Positives = 52/122 (42%)
Frame = -2
Query: 390 NDTFCXDVAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDYI 211
+D DV H+ ++V ++ H RV +++ E R L + A+ +QEV V P + D +
Sbjct: 373 DDALGDDVTLHDAAEDVDEHRLHRRVGQDELEGRRHLLLARAAAHVQEVGRVAPHQLDGV 432
Query: 210 HRSHS*SSTVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKLG 31
H H + V+H G+ V+ + L + E +V+ L
Sbjct: 433 HGGHGQARAVHHAADVAVQRDVGQVELLGLRLAGLLFRQVAVVEQLLVLEERVLVEGHLR 492
Query: 30 IQ 25
++
Sbjct: 493 VE 494
>UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta
subunit; n=3; Eutheria|Rep: Succinate-CoA ligase,
ADP-forming, beta subunit - Homo sapiens (Human)
Length = 154
Score = 44.8 bits (101), Expect = 6e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKE 117
G C+DAK FD + +RQK++F L+D TQED ++
Sbjct: 118 GAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERD 153
>UniRef50_Q17DQ8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 253
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIE 123
GQ +DAK FDD A+F QK++F++ DPKEIE
Sbjct: 56 GQVISVDAKLNFDDNAQFGQKDIFAMDVHEDTDPKEIE 93
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1
Query: 283 VSEAFKIILSDPKVTAILVNIFGGIMRCDVXAEGIINA 396
V + +I+ SDP V AILVNIFG I+ A+GI+NA
Sbjct: 112 VLKTLQILTSDPNVKAILVNIFGEIVNFTTIADGIVNA 149
>UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=3; Clostridia|Rep:
ATP-dependent carboxylate-amine ligase-like, ATP-grasp -
Desulfitobacterium hafniense (strain DCB-2)
Length = 425
Score = 38.7 bits (86), Expect = 0.040
Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 16/129 (12%)
Frame = +1
Query: 10 GQFFCLDAKFRFDDXAEFRQKEL-FSLRDTTQEDPKEIEAAKY--------------NLN 144
G C D K D+ + R E F + +P E++ + N+
Sbjct: 199 GNLICADCKMEIDNSSVGRHPEFGFDIARDLPGEPTELDYIGWSIEETDARGTGFLMNMG 258
Query: 145 YIALD-GNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPK 321
Y + G +G G G AM +D + G PAN+ D G + K +LS P
Sbjct: 259 YDEVSPGYVGYHPIGGGSAMMGLDALNQVGLKPANYADTSGNPVASKIYRVAKSVLSQPN 318
Query: 322 VTAILVNIF 348
+ L+ F
Sbjct: 319 IDGYLLGGF 327
>UniRef50_A0VT03 Cluster: Putative uncharacterized protein; n=1;
Dinoroseobacter shibae DFL 12|Rep: Putative
uncharacterized protein - Dinoroseobacter shibae DFL 12
Length = 502
Score = 37.5 bits (83), Expect = 0.093
Identities = 27/118 (22%), Positives = 53/118 (44%)
Frame = -2
Query: 369 VAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDYIHRSHS*S 190
VA + K+V ++ + V ++ ERL D+ + + DI+E+ + + D++HR H
Sbjct: 96 VAAVDAGKDVDEDHADILVRQHRAERLADAFRTGPAADIEEIRRLPARQLDHVHRRHGKP 155
Query: 189 STVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKLGIQTEE 16
V++ V VFL+ ++Q + L +E V+ L +Q +
Sbjct: 156 GAVDNAADIPVQAHISQPVIGGEALARVFLARIAQGRDLRPAEERVGVERHLRVQRHQ 213
>UniRef50_A7DCY4 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 422
Score = 37.1 bits (82), Expect = 0.12
Identities = 24/117 (20%), Positives = 50/117 (42%)
Frame = -2
Query: 369 VAPHNTTKNVHQNSCHLRV*ENDFERLRDSLXSSASTDIQEVSGVTPVEFDYIHRSHS*S 190
VA + ++V ++ H+ V E++ E D++ + + IQEV + D++H H +
Sbjct: 65 VAAVDAGEDVDEDRLHVAVREDEAEGRGDAIRAGTAAHIQEVCRLAARVLDHVHGRHGQT 124
Query: 189 STVNHTPXXXXXXXXXXXVFSCFNFLGVFLSSVSQTK*LFLSEFSXIVKSKLGIQTE 19
V+ V G+ L V + + +E +V+ LG++ +
Sbjct: 125 RAVDDAADFALEADIAEIVLGSLGLAGIALRRVVHVRDVAAAEQGVVVEGHLGVECQ 181
>UniRef50_Q64CM7 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos1D1|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos1D1
Length = 448
Score = 34.7 bits (76), Expect = 0.66
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 238 PANFLDVGGGATXQAVSEAFKIILSDPKVTAILV-NIFGGIMRCDVXAEGIINA 396
PAN LD G A+ + + I+LSDP + A+LV + ++ + AE +I+A
Sbjct: 339 PANPLDTAGDASYEMFRDVVDIVLSDPGINALLVIYVHAEMVDPCLPAEAVIDA 392
>UniRef50_Q181Y9 Cluster: Putative multidrug efflux pump, membrane
protein; n=2; Clostridium difficile|Rep: Putative
multidrug efflux pump, membrane protein - Clostridium
difficile (strain 630)
Length = 1044
Score = 33.1 bits (72), Expect = 2.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIE---AAKYNLNYIALDGNIGCMVNGAGLA 198
+A+ F FR E SL DTTQE I+ A +Y +N + G + +NG +
Sbjct: 676 EAEKEFSSIKGFRNVET-SLTDTTQEAQFTIDKHKAQEYGVNTAEIAGMLRTAINGDSVT 734
Query: 199 MATMDIIKL 225
AT+D K+
Sbjct: 735 TATIDDYKV 743
>UniRef50_A4G6C1 Cluster: Sensor protein; n=2; Oxalobacteraceae|Rep:
Sensor protein - Herminiimonas arsenicoxydans
Length = 455
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 KELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMATMD-IIKLYGGDPAN 246
K + + D P E E A+ + +D G NGAGL +A +D I+K +GG
Sbjct: 372 KVMLEIADHGAGVPAE-EIARLLRPFTRMDSARG-QANGAGLGLAIVDRIVKRHGGKLHL 429
Query: 247 FLDVGGGATXQAV 285
F GGG T Q V
Sbjct: 430 FNRDGGGLTVQIV 442
>UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Nostocaceae|Rep: Succinyl-CoA synthetase beta chain -
Anabaena sp. (strain PCC 7120)
Length = 408
Score = 32.7 bits (71), Expect = 2.7
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
Frame = +1
Query: 4 LTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYN---LNYIALDGNIGC 174
L G+ L+ K ++ A R E+ ++ + P+ + + N N + I
Sbjct: 189 LAGEVMALNGKVGVNERAIGRHPEIAAM--AAKIVPRHYDKSFSNGRDWNNLEKQRRISI 246
Query: 175 MVNGAGLAMATMDIIKLYGGDP--------ANFLDVGGGATXQAVSEAFKIILSDPKVTA 330
+ NG G +AT D++ GG P A D+ +++ + +D
Sbjct: 247 LGNGTGSILATYDLVASGGGKPGICLNLRHAAITDLSPTKFGDRLTKGLNTLSADKNTQV 306
Query: 331 ILVNIFGGIMRCDVXAEGI 387
IL+N+ G I + + A+ I
Sbjct: 307 ILINLLGSIPQPEEAAQAI 325
>UniRef50_A6CGW6 Cluster: Polyhydroxyalkanoate synthesis repressor
PhaR; n=1; Planctomyces maris DSM 8797|Rep:
Polyhydroxyalkanoate synthesis repressor PhaR -
Planctomyces maris DSM 8797
Length = 1165
Score = 32.7 bits (71), Expect = 2.7
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 160 GNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSD 315
G+IG V + A TM+ + + DP++ +D+G ++++FK +SD
Sbjct: 890 GSIGAEVTLSSGAKLTMNGVGTFSYDPSSHVDIGDVVGTATITDSFKYTISD 941
>UniRef50_UPI0000DD8625 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 279
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 278 WXVAPPPTSKKLAGSPP*SLIISIVAIANPAPLTIHPMFPSRAM 147
W P P + L +P S + +V PAP +HP P+R++
Sbjct: 64 WCPDPRPLTLDLRAAPTLSTLSGVVRRETPAPARVHPGGPARSL 107
>UniRef50_Q3A4D7 Cluster: Putative amino-sugar biosynthesis protein;
n=1; Pelobacter carbinolicus DSM 2380|Rep: Putative
amino-sugar biosynthesis protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 395
Score = 32.3 bits (70), Expect = 3.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 202 ATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGG 354
AT ++++ G DP FLDV G + S K + P A++V FGG
Sbjct: 90 ATAEVVRYLGADPI-FLDVEYGTSLVTPSILEKAVADHPGAKALIVVHFGG 139
>UniRef50_A3GFF1 Cluster: Actin-related protein; n=4;
Saccharomycetaceae|Rep: Actin-related protein - Pichia
stipitis (Yeast)
Length = 835
Score = 32.3 bits (70), Expect = 3.5
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 76 LFSLRDTT-QEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFL 252
L L+ TT ++DP E + + NL + L+ I + AGL+ I KLY N L
Sbjct: 618 LNELKGTTGEQDPVEEFSGESNLRRVPLEKAIIESITNAGLSTDLNKIKKLYD----NLL 673
Query: 253 DVGGGATXQAVSEAFKIILSD 315
VGGG A + +ILSD
Sbjct: 674 IVGGGF---AKISGYDLILSD 691
>UniRef50_Q8YMR3 Cluster: Subtilase family peptidase; n=4;
Cyanobacteria|Rep: Subtilase family peptidase - Anabaena
sp. (strain PCC 7120)
Length = 703
Score = 31.9 bits (69), Expect = 4.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 181 NGAGLAMATMDIIKLYGGDPANFLDVGGG---ATXQAVSEAFKIILSDPKVTA 330
N +GL M T DI+ G DP NF GG AT A ++ +P +TA
Sbjct: 464 NLSGLGMLTTDIVGAAGYDPGNFTSNFGGTSSATPVVAGVAALVLSVNPDLTA 516
>UniRef50_Q6C1U6 Cluster: Similar to wi|NCU09191.1 Neurospora crassa
NCU09191. 1 hypothetical protein; n=2; Eukaryota|Rep:
Similar to wi|NCU09191.1 Neurospora crassa NCU09191. 1
hypothetical protein - Yarrowia lipolytica (Candida
lipolytica)
Length = 1134
Score = 31.9 bits (69), Expect = 4.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 297 QNHSLRPEGDSYFGEHFWWYY 359
+ H+LRP SY+ E FWW++
Sbjct: 552 EQHALRPMRPSYWFEKFWWFF 572
>UniRef50_A2TPX2 Cluster: Type I restriction modification system M
subunit; n=2; Flavobacteriaceae|Rep: Type I restriction
modification system M subunit - Dokdonia donghaensis
MED134
Length = 544
Score = 31.5 bits (68), Expect = 6.1
Identities = 19/74 (25%), Positives = 41/74 (55%)
Frame = +1
Query: 97 TQEDPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATX 276
T D E EAAK +++ + +G + L +A+M++ L+G + N +DV +
Sbjct: 204 THYDVMEREAAKEHIDTMMFNG---MEFDATMLRIASMNLF-LHGVEAPNIIDVDAVSKD 259
Query: 277 QAVSEAFKIILSDP 318
+++A+ ++L++P
Sbjct: 260 NDIADAYTLVLANP 273
>UniRef50_Q01BG0 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 881
Score = 31.5 bits (68), Expect = 6.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 353 PPKMFTKIA-VTFGSERMILNASETAWXVAPPPTSKKLAGSPP*SLIISIVAIANPAP 183
P F + A +++G ++ IL+ T PP +PP + IS+ AIAN AP
Sbjct: 277 PAHGFRRTAYLSYGHKQFILDVQTTPLSPPPPSPPPSSPQAPPIPIEISLQAIANHAP 334
>UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11;
Chlorobiaceae|Rep: Citrate lyase, subunit1 - Chlorobium
tepidum
Length = 398
Score = 31.1 bits (67), Expect = 8.1
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +1
Query: 28 DAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAA-KYNLNYIALDGN-IGCMVNGAGLAM 201
DA+FR D E+ ++ +I++ K ++ ++ + G I + G G ++
Sbjct: 213 DARFRHADWDFKPVSEIGRPFTEAEQQIMDIDSRIKGSVKFVEVPGGEIALLTAGGGASV 272
Query: 202 ATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMR-CDVXA 378
D + GG AN+ + G AV + I P + I+V G I DV A
Sbjct: 273 FYADAVVARGGTIANYAEYSGDPPDWAVEALTETICRLPNIKHIIVG--GAIANFTDVKA 330
Query: 379 --EGIIN 393
GIIN
Sbjct: 331 TFSGIIN 337
>UniRef50_A3J614 Cluster: Glucose/galactose transporter family
protein; n=1; Flavobacteria bacterium BAL38|Rep:
Glucose/galactose transporter family protein -
Flavobacteria bacterium BAL38
Length = 612
Score = 31.1 bits (67), Expect = 8.1
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 184 GAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGI 357
GAG + ++ G F+ G + Q + F I+L DPK A VN+ GGI
Sbjct: 97 GAGAMIIAVEASVYTGMLVGLFIVALGFSLQQTAANPFAILLGDPKTGASRVNLGGGI 154
>UniRef50_A0QRE3 Cluster: Dipeptide transport system permease
protein DppB; n=1; Mycobacterium smegmatis str. MC2
155|Rep: Dipeptide transport system permease protein
DppB - Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155)
Length = 319
Score = 31.1 bits (67), Expect = 8.1
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 190 GLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRCD 369
G+++ +++L GDPA + +G GAT +AV+ + D + + GG++R D
Sbjct: 18 GVSLIVFLLLQLVPGDPAVTI-LGSGATAEAVAALRTELGLDRALPIQFFDYLGGLVRGD 76
Query: 370 VXAEGIINA 396
+ +NA
Sbjct: 77 LGRSLTVNA 85
>UniRef50_A5KAL8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1608
Score = 31.1 bits (67), Expect = 8.1
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 58 EFRQKELFSLRDTTQE----DPKEIEAAKYNLNYIALDGNIGCMVNGAGLAMATMDIIKL 225
E K +F R T Q +PKE A + N + + DGN G NG +A ++
Sbjct: 383 EKNYKHIFGSRCTDQAAFKGEPKEFLAREANPHGGSADGNKGGDTNGTYIAGGVLNTNDY 442
Query: 226 Y-GGDPANFLDVGGGATXQAVSE 291
+ GGD N G AT ++ E
Sbjct: 443 HNGGDVGNSKGRSGNATQRSGGE 465
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,119,444
Number of Sequences: 1657284
Number of extensions: 6313471
Number of successful extensions: 17723
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 17272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17676
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -