Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311F12f
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058331-1|AAL13560.1|  503|Drosophila melanogaster GH10480p pro...   235   2e-62
AE014297-840|AAF54308.2|  502|Drosophila melanogaster CG11963-PA...   232   1e-61
AY051980-1|AAK93404.1|  416|Drosophila melanogaster LD44970p pro...   184   3e-47
AJ252069-1|CAB64384.1|  416|Drosophila melanogaster putative suc...   184   3e-47
AE014296-966|AAF50771.1|  416|Drosophila melanogaster CG10622-PA...   184   3e-47
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   2.2  
AY102653-1|AAM27482.1|  113|Drosophila melanogaster GH02603p pro...    27   9.0  

>AY058331-1|AAL13560.1|  503|Drosophila melanogaster GH10480p
           protein.
          Length = 503

 Score =  235 bits (575), Expect = 2e-62
 Identities = 112/132 (84%), Positives = 119/132 (90%)
 Frame = +1

Query: 1   ALTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMV 180
           A++G FF LDAK RFDD AEFRQKELF+LRD TQEDPKE+EAAKYNLNYIALDG IGCMV
Sbjct: 249 AMSGCFFALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMV 308

Query: 181 NGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIM 360
           NGAGLAMATMDIIKLYGG+PANFLDVGGGAT +AV  AFKII SDPKV  ILVNIFGGIM
Sbjct: 309 NGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIM 368

Query: 361 RCDVXAEGIINA 396
           RCDV AEGII+A
Sbjct: 369 RCDVIAEGIISA 380


>AE014297-840|AAF54308.2|  502|Drosophila melanogaster CG11963-PA
           protein.
          Length = 502

 Score =  232 bits (567), Expect = 1e-61
 Identities = 112/132 (84%), Positives = 119/132 (90%)
 Frame = +1

Query: 1   ALTGQFFCLDAKFRFDDXAEFRQKELFSLRDTTQEDPKEIEAAKYNLNYIALDGNIGCMV 180
           A++G FF LDAK RFDD AEFRQKELF+LRD TQEDPKE+EAAKYNLNYIALDG IGCMV
Sbjct: 249 AMSG-FFALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMV 307

Query: 181 NGAGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIM 360
           NGAGLAMATMDIIKLYGG+PANFLDVGGGAT +AV  AFKII SDPKV  ILVNIFGGIM
Sbjct: 308 NGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIM 367

Query: 361 RCDVXAEGIINA 396
           RCDV AEGII+A
Sbjct: 368 RCDVIAEGIISA 379


>AY051980-1|AAK93404.1|  416|Drosophila melanogaster LD44970p
           protein.
          Length = 416

 Score =  184 bits (449), Expect = 3e-47
 Identities = 84/130 (64%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = +1

Query: 10  GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQE-DPKEIEAAKYNLNYIALDGNIGCMVNG 186
           G+   +DAK  FDD A+FRQK++FS+  T +E DP+E+EAAKYNLNY+A+DGNIGC+VNG
Sbjct: 236 GEVISVDAKLNFDDNAQFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNG 295

Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
           AGLAMATMDIIKL GG+PANFLDVGGG     V++AF+I+ +DPKV  ILVN+FGGI+ C
Sbjct: 296 AGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNC 355

Query: 367 DVXAEGIINA 396
              A GI+ A
Sbjct: 356 ATIANGIVAA 365


>AJ252069-1|CAB64384.1|  416|Drosophila melanogaster putative
           succinyl-coa ligase (GDP-forming) beta-chain precursor
           protein.
          Length = 416

 Score =  184 bits (449), Expect = 3e-47
 Identities = 84/130 (64%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = +1

Query: 10  GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQE-DPKEIEAAKYNLNYIALDGNIGCMVNG 186
           G+   +DAK  FDD A+FRQK++FS+  T +E DP+E+EAAKYNLNY+A+DGNIGC+VNG
Sbjct: 236 GEVISVDAKLNFDDNAQFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNG 295

Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
           AGLAMATMDIIKL GG+PANFLDVGGG     V++AF+I+ +DPKV  ILVN+FGGI+ C
Sbjct: 296 AGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNC 355

Query: 367 DVXAEGIINA 396
              A GI+ A
Sbjct: 356 ATIANGIVAA 365


>AE014296-966|AAF50771.1|  416|Drosophila melanogaster CG10622-PA,
           isoform A protein.
          Length = 416

 Score =  184 bits (449), Expect = 3e-47
 Identities = 84/130 (64%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = +1

Query: 10  GQFFCLDAKFRFDDXAEFRQKELFSLRDTTQE-DPKEIEAAKYNLNYIALDGNIGCMVNG 186
           G+   +DAK  FDD A+FRQK++FS+  T +E DP+E+EAAKYNLNY+A+DGNIGC+VNG
Sbjct: 236 GEVISVDAKLNFDDNAQFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNG 295

Query: 187 AGLAMATMDIIKLYGGDPANFLDVGGGATXQAVSEAFKIILSDPKVTAILVNIFGGIMRC 366
           AGLAMATMDIIKL GG+PANFLDVGGG     V++AF+I+ +DPKV  ILVN+FGGI+ C
Sbjct: 296 AGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNC 355

Query: 367 DVXAEGIINA 396
              A GI+ A
Sbjct: 356 ATIANGIVAA 365


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
            protein.
          Length = 1976

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 356  IPPKMFTKIAVTFGSERMILN---ASETAWXVAPPPTSKKLAGSPP*SLII 213
            IPP + +   VT  S ++ +    A  T+    PPPT+K+L+   P S  +
Sbjct: 1374 IPPMLASSTTVTTSSTKITITEAPARSTSTTSVPPPTTKRLSTLKPVSYYV 1424


>AY102653-1|AAM27482.1|  113|Drosophila melanogaster GH02603p
           protein.
          Length = 113

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 315 PEGDSYFGEHFWWYYEVRRXCRRY 386
           P G+SYF + +W Y+  RR    Y
Sbjct: 81  PYGNSYFVQPYWHYFHDRRFGANY 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,092,005
Number of Sequences: 53049
Number of extensions: 308753
Number of successful extensions: 1113
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)