Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311F11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039717-4|AAO21385.1|  303|Caenorhabditis elegans Abnormal daue...    31   0.50 
AF039717-3|AAK82917.1|  530|Caenorhabditis elegans Abnormal daue...    31   0.50 
AF039717-2|AAK82918.1|  508|Caenorhabditis elegans Abnormal daue...    31   0.50 
AF039717-1|AAK82919.1|  510|Caenorhabditis elegans Abnormal daue...    31   0.50 
AF032112-1|AAC47803.1|  510|Caenorhabditis elegans DAF-16 protein.     31   0.50 
AF020344-1|AAB84392.1|  530|Caenorhabditis elegans fork head-rel...    31   0.50 
AF020343-1|AAB84391.1|  508|Caenorhabditis elegans fork head-rel...    31   0.50 
AF020342-1|AAB84390.1|  510|Caenorhabditis elegans fork head-rel...    31   0.50 
Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical p...    29   2.0  
U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    28   3.5  
Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc...    28   4.7  
Z73969-18|CAI79128.1|   73|Caenorhabditis elegans Hypothetical p...    27   8.1  
U39999-13|AAA81111.1|  320|Caenorhabditis elegans Hypothetical p...    27   8.1  
AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily a...    27   8.1  

>AF039717-4|AAO21385.1|  303|Caenorhabditis elegans Abnormal dauer
           formation protein16, isoform e protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 177 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 229


>AF039717-3|AAK82917.1|  530|Caenorhabditis elegans Abnormal dauer
           formation protein16, isoform a protein.
          Length = 530

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 404 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 456


>AF039717-2|AAK82918.1|  508|Caenorhabditis elegans Abnormal dauer
           formation protein16, isoform b protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 382 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 434


>AF039717-1|AAK82919.1|  510|Caenorhabditis elegans Abnormal dauer
           formation protein16, isoform c protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436


>AF032112-1|AAC47803.1|  510|Caenorhabditis elegans DAF-16 protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436


>AF020344-1|AAB84392.1|  530|Caenorhabditis elegans fork
           head-related transcriptionfactor DAF-16b protein.
          Length = 530

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 404 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 456


>AF020343-1|AAB84391.1|  508|Caenorhabditis elegans fork
           head-related transcriptionfactor DAF-16a2 protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 382 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 434


>AF020342-1|AAB84390.1|  510|Caenorhabditis elegans fork
           head-related transcriptionfactor DAF-16a1 protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 294 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 467
           +P A  P  H  N+ R SC   P   +         VP+T F   P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436


>Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical
           protein C12D8.18 protein.
          Length = 111

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 357 PTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSYNGGLSQTFTPTQ 488
           P+Y   YG    G+    GFG+     AY+ Y G     F PTQ
Sbjct: 72  PSYYGGYGYGAYGAYGGYGFGS-----AYAGYYGKREAGFGPTQ 110


>U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical
           protein M02D8.5 protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 396 SVPTTGFGTQPSPYAYSSYNGGLSQTFTPTQQDYS 500
           +V  TGF T+  P  Y   NG  +  F+ T QD+S
Sbjct: 120 NVKITGFATEDEPVVYYFQNGA-NAIFSITHQDHS 153


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 288 YNQPYAAYPPPHNTN---NRSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSS 449
           Y QP    P    T+   N    KA    +S+   +G  S   T FGT PSP  Y+S
Sbjct: 221 YKQPTHPSPSQRETDFLRNLQRQKAEAHNMSSSWYAGDQSSRQTDFGTLPSPQHYNS 277


>Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical
           protein F52F12.6 protein.
          Length = 539

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = +3

Query: 297 PYAAYPPPHNTNNRSSCKATPTYLSAYGMSGVGSVPTTGF---GTQPSP---YAYSSYNG 458
           P  A  PPH++ + S   +  T+ +      + + PT  F   G+ PSP   Y++S    
Sbjct: 201 PLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIPSPGTGYSWSIRRE 260

Query: 459 GLSQTFTP 482
           G     TP
Sbjct: 261 GKLACPTP 268


>U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc
           finger proteinC.e-MyT1 protein.
          Length = 539

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = +3

Query: 297 PYAAYPPPHNTNNRSSCKATPTYLSAYGMSGVGSVPTTGF---GTQPSP---YAYSSYNG 458
           P  A  PPH++ + S   +  T+ +      + + PT  F   G+ PSP   Y++S    
Sbjct: 201 PLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIPSPGTGYSWSIRRE 260

Query: 459 GLSQTFTP 482
           G     TP
Sbjct: 261 GKLACPTP 268


>Z73969-18|CAI79128.1|   73|Caenorhabditis elegans Hypothetical
           protein C12D8.19 protein.
          Length = 73

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 357 PTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSYNGGLSQTFTPTQ 488
           P+Y + YG    G+    G G+     AY+ Y G     F PTQ
Sbjct: 34  PSYYAGYGYGAYGTYGGYGLGS-----AYAGYYGKREAGFGPTQ 72


>U39999-13|AAA81111.1|  320|Caenorhabditis elegans Hypothetical
           protein F41G3.2 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +3

Query: 321 HNTNNRSSCKATPTYLSAYGMSGVGSVPTT---GFGTQPSPYAYSSYNGGLSQTFTPT 485
           HN ++  S +++     AYG +  GS+P         QP  + + S +GG  Q  T T
Sbjct: 136 HNIHHMKSVESSYHLSGAYGNANYGSMPRAQRKPGSYQPQMHDHRSQDGGYRQPQTET 193


>AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 123 protein.
          Length = 655

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 156 CEADVALYGETLPYDQTALPYQYYN 230
           C ++++LY   L  D++ +PY+Y++
Sbjct: 41  CPSNISLYVNHLDSDRSVIPYEYHS 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,500,228
Number of Sequences: 27780
Number of extensions: 242400
Number of successful extensions: 879
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)