Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311F08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 141 2e-34
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 141 2e-34
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 141 2e-34
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 141 2e-34
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 141 2e-34
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 141 2e-34
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 141 2e-34
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 141 2e-34
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 141 2e-34
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 136 7e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 135 2e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 85 2e-17
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 72 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 4e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 40 0.001
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.38
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 4.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 267 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 326
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 327 VHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 297 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 356
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 357 VHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 371 VHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 136 bits (330), Expect = 7e-33
Identities = 64/66 (96%), Positives = 64/66 (96%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 310 ADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 370 VHRKCF 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 135 bits (327), Expect = 2e-32
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
ADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
Sbjct: 311 ADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
Query: 341 VHRKCF 324
VHRKCF
Sbjct: 370 VHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 85.4 bits (202), Expect = 2e-17
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = -1
Query: 518 DRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 348
+R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDESG
Sbjct: 369 ERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGK 428
Query: 347 SIVHRKC 327
SIV +KC
Sbjct: 429 SIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -1
Query: 518 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 339
DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +
Sbjct: 310 DRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAM 369
Query: 338 HRKCF 324
H++ F
Sbjct: 370 HKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1
Query: 491 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 342
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -1
Query: 473 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 351
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/52 (30%), Positives = 34/52 (65%)
Frame = -1
Query: 521 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 366
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 429 PYGVLPLWRSNDLNLHCRWGESCD 500
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 429 PYGVLPLWRSNDLNLHCRWGESCD 500
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 429 PYGVLPLWRSNDLNLHCRWGESCD 500
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 265 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 357
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 368 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 267
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 265 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 357
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 449 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 288
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,726,547
Number of Sequences: 27780
Number of extensions: 185173
Number of successful extensions: 560
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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