Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311F07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.94 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 272 VYYQR-WQSVHLDKKMLL 222
           VY  R WQ +HL+KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 260 FDNRRLKSNCCYRLLSR 310
           +D    K + CYRLLSR
Sbjct: 305 YDRGESKGSSCYRLLSR 321


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 366 MPPQCSGEMQAC 401
           MP +C G +Q+C
Sbjct: 345 MPHRCHGNLQSC 356


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = -2

Query: 268 IIKGGNLCIWTKK 230
           ++ GG +C+W+++
Sbjct: 504 LVLGGEVCLWSEQ 516


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 327 IHILCESNEELGDMPPQCSGEM 392
           I+++ E  +ELG +   C+GE+
Sbjct: 33  INLIKEEFDELGRLQRICNGEV 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,828
Number of Sequences: 336
Number of extensions: 2368
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)