Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311F06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   5.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   5.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 142 ERHESKDFVASKHL*YY*LTVEIFLFRFKSKKNNYDVID 258
           ++H+S  F  S ++  Y L     LFR  + +NN  VI+
Sbjct: 49  KQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNSLVIN 87


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 142 ERHESKDFVASKHL*YY*LTVEIFLFRFKSKKNNYDVID 258
           ++H+S  F  S ++  Y L     LFR  + +NN  VI+
Sbjct: 49  KQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNSLVIN 87


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 459 DYNQFRHLCVL 427
           DYN+  HLC L
Sbjct: 270 DYNRLCHLCFL 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,803
Number of Sequences: 336
Number of extensions: 1736
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)