Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   0.71 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.94 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   2.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.9  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 248 PIFT*FYARYNKYTCRGFQPCFIML 174
           P++T  YARY+ Y   G  P  I L
Sbjct: 167 PVYTHHYARYHPYPNFGVPPAGIPL 191


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 132 VFYLAQKFSKPSSL*HYKTRLKTSTCILIVPCIKLSKYW 248
           +F++   +  P++  +Y +  K   C+L+V  I    YW
Sbjct: 24  IFFITPWYDFPTNQKYYPSLAKCYACLLMVVKILWVIYW 62


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  FKNLLFKWK*KRIVFYL 143
           F++L F WK  R+V+ L
Sbjct: 43  FRSLRFSWKSARVVYAL 59


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  FKNLLFKWK*KRIVFYL 143
           F++L F WK  R+V+ L
Sbjct: 43  FRSLRFSWKSARVVYAL 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,878
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)