Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.7  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 276 KREAKSRYKVVYADLINI 223
           K   K +Y+VVY DL  I
Sbjct: 152 KTRTKDKYRVVYTDLQRI 169


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 186  YFVCIN*VLVISKC*LNLHTPP 251
            ++VC+N  LV   C   LH  P
Sbjct: 1221 FYVCVNGHLVPQNCAPGLHYNP 1242


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 209 TSNFKMLIKSAYTTLYL 259
           T NF +L+   Y TLY+
Sbjct: 222 TINFVVLLGDLYVTLYI 238


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 276 KREAKSRYKVVYAD 235
           K   K +Y+VVY D
Sbjct: 152 KTRTKDKYRVVYTD 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,588
Number of Sequences: 336
Number of extensions: 1769
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)