Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017227-1|AAH17227.1|  301|Homo sapiens phosducin-like protein.       29   7.5  
AL359512-2|CAI94958.1|  301|Homo sapiens phosducin-like protein.       29   7.5  
AF031463-1|AAD01930.1|  301|Homo sapiens phosducin-like protein ...    29   7.5  
AK124415-1|BAC85848.1|  809|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AB055660-1|BAB84689.1| 1995|Homo sapiens Shroom-related protein ...    29   9.9  
AB040914-1|BAA96005.1| 1380|Homo sapiens KIAA1481 protein protein.     29   9.9  

>BC017227-1|AAH17227.1|  301|Homo sapiens phosducin-like protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = +1

Query: 331 QSHCRAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIPSVKQFKV 486
           +  CR  +  I+ + +TC+S LD +    ++Q +K    ++SG  ++K+F +
Sbjct: 78  EEQCREMERLIKKLSMTCRSHLDEE---EEQQKQKDLQEKISGKMTLKEFAI 126


>AL359512-2|CAI94958.1|  301|Homo sapiens phosducin-like protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = +1

Query: 331 QSHCRAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIPSVKQFKV 486
           +  CR  +  I+ + +TC+S LD +    ++Q +K    ++SG  ++K+F +
Sbjct: 78  EEQCREMERLIKKLSMTCRSHLDEE---EEQQKQKDLQEKISGKMTLKEFAI 126


>AF031463-1|AAD01930.1|  301|Homo sapiens phosducin-like protein
           protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = +1

Query: 331 QSHCRAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIPSVKQFKV 486
           +  CR  +  I+ + +TC+S LD +    ++Q +K    ++SG  ++K+F +
Sbjct: 78  EEQCREMERLIKKLSMTCRSHLDEE---EEQQKQKDLQEKISGKMTLKEFAI 126


>AK124415-1|BAC85848.1|  809|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42424 fis, clone BLADE2004089, moderately
           similar to Mus musculus PDZ domain actin binding protein
           Shroom ).
          Length = 809

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 52  LNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQSSGEDQWQ 204
           L E +  P  Q+L   A+     P+     +LRS  T+Q  S+   E +W+
Sbjct: 366 LEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWR 416


>AB055660-1|BAB84689.1| 1995|Homo sapiens Shroom-related protein
            protein.
          Length = 1995

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 52   LNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQSSGEDQWQ 204
            L E +  P  Q+L   A+     P+     +LRS  T+Q  S+   E +W+
Sbjct: 854  LEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWR 904


>AB040914-1|BAA96005.1| 1380|Homo sapiens KIAA1481 protein protein.
          Length = 1380

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 52  LNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQSSGEDQWQ 204
           L E +  P  Q+L   A+     P+     +LRS  T+Q  S+   E +W+
Sbjct: 239 LEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWR 289


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.130    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,449,211
Number of Sequences: 237096
Number of extensions: 1656531
Number of successful extensions: 4952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4952
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)