BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS311E08f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 35 0.041 X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 34 0.054 U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 34 0.071 U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 33 0.12 AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 32 0.29 AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical... 30 1.2 U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 1.5 U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 1.5 AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical ... 29 1.5 AF016669-3|AAB66097.1| 275|Caenorhabditis elegans Hypothetical ... 29 1.5 Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 2.0 Z66560-3|CAA91451.2| 265|Caenorhabditis elegans Hypothetical pr... 29 2.0 AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode ast... 28 3.5 AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 3.5 Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.7 Z92824-7|CAB07310.1| 156|Caenorhabditis elegans B0413.7 protein. 27 6.2 U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 6.2 U64609-8|AAB04605.2| 465|Caenorhabditis elegans Hypothetical pr... 27 6.2 AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 27 6.2 AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 27 6.2 Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 27 8.1 U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical pr... 27 8.1 AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 8.1 AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 27 8.1 AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 27 8.1 >U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin structural genes (yolk protein genes) protein 2, isoform a protein. Length = 1613 Score = 34.7 bits (76), Expect = 0.041 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Frame = +1 Query: 166 QEESQSSGED-QWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHC 342 Q + SS E ++ E KS+ + + ++ ++ Q E IC + V C+ Sbjct: 1498 QSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGY 1557 Query: 343 RAGDYKIQHVQVTCKSKLDHD-FRMYKEQIKKGQNPEVSGIPSVKQFKVPVTC 498 + + ++ TC + + D R+ KE ++ + + V+ KVP C Sbjct: 1558 EVEQQQQRKIRFTCLQRHNRDASRLLKESRQQPLQLDDYPVSFVESVKVPTAC 1610 >X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin protein. Length = 1613 Score = 34.3 bits (75), Expect = 0.054 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Frame = +1 Query: 166 QEESQSSGED-QWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHC 342 Q + SS E ++ E KS+ + + ++ ++ Q E IC + V C+ Sbjct: 1498 QSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGY 1557 Query: 343 RAGDYKIQHVQVTCKSKLDHD-FRMYKEQIKKGQNPEVSGIPSVKQFKVPVTC 498 + + ++ TC + + D R+ KE ++ + + V+ KVP C Sbjct: 1558 EVEQQQQRKIRFTCWQRHNRDASRLLKESRQQPLQLDDYPVSFVESVKVPTAC 1610 >U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin structural genes (yolk protein genes) protein 2, isoform b protein. Length = 1558 Score = 33.9 bits (74), Expect = 0.071 Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 1/111 (0%) Frame = +1 Query: 169 EESQSSGEDQWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHCRA 348 +E S ++ E KS+ + + ++ ++ Q E IC + V C+ Sbjct: 1445 DEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGYEV 1504 Query: 349 GDYKIQHVQVTCKSKLDHD-FRMYKEQIKKGQNPEVSGIPSVKQFKVPVTC 498 + + ++ TC + + D R+ KE ++ + + V+ KVP C Sbjct: 1505 EQQQQRKIRFTCLQRHNRDASRLLKESRQQPLQLDDYPVSFVESVKVPTAC 1555 >U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin structural genes (yolk protein genes) protein 5 protein. Length = 1603 Score = 33.1 bits (72), Expect = 0.12 Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 2/114 (1%) Frame = +1 Query: 163 WQEESQSSGEDQWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHC 342 W E + S ++S + Y+S +YD+ + E+ ++ E +C + V C+ Sbjct: 1491 WNREEKKS---DYESSSDYES-NYDEKETEKELVKKTLIKEFSNRVCFSIEPVSECRRGL 1546 Query: 343 RAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIP--SVKQFKVPVTC 498 + + ++ TC + + R + ++ ++ E+ P V+ K+P C Sbjct: 1547 ESEKTSNKKIRFTCMPRHSKNARRFLKEAREQTVAELVDFPVSFVESVKIPTAC 1600 >AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin structural genes (yolk protein genes) protein 4 protein. Length = 1603 Score = 31.9 bits (69), Expect = 0.29 Identities = 21/114 (18%), Positives = 50/114 (43%), Gaps = 2/114 (1%) Frame = +1 Query: 163 WQEESQSSGEDQWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHC 342 W E + S ++S + Y+S +YD+ + E+ ++ E +C + V C+ Sbjct: 1491 WNREEKKS---DYESSSDYES-NYDEKETEKELVKKTLIKEFSNRVCFSIEPVSECRRGL 1546 Query: 343 RAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIP--SVKQFKVPVTC 498 + + ++ TC + + R + ++ ++ ++ P V+ K+P C Sbjct: 1547 ESEKTSNKKIRFTCMPRHSKNARRFLKEAREQTVADLVDFPVSFVESVKIPTAC 1600 >AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical protein F46F5.5 protein. Length = 322 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +2 Query: 188 VRINGSLKPSISLEATTNTRALVKLGNR---CSFMRTTAISVSQLRECPRVSRIAV 346 V + GS+K + L N A+V LGN ++ I+VS L+E + R+ + Sbjct: 260 VEMVGSIKEKVKLARNMNMTAIVPLGNLDEVPKMLKDEVITVSSLKEAVEIIRMRI 315 >U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase protein 25, isoformb protein. Length = 1130 Score = 29.5 bits (63), Expect = 1.5 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +3 Query: 288 PRRYLY-HNFESALVSVALP-CWRLQNTARSSDV*IETRPRLPHVQRTDQKGPEP 446 P LY N S+L S A+ + +TAR + V ETRP PHV +K EP Sbjct: 826 PSALLYGSNSTSSLPSAAVSTASSVPSTARDNPV--ETRPSQPHVTMPPKKSSEP 878 >U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase protein 25, isoforma protein. Length = 1237 Score = 29.5 bits (63), Expect = 1.5 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +3 Query: 288 PRRYLY-HNFESALVSVALP-CWRLQNTARSSDV*IETRPRLPHVQRTDQKGPEP 446 P LY N S+L S A+ + +TAR + V ETRP PHV +K EP Sbjct: 933 PSALLYGSNSTSSLPSAAVSTASSVPSTARDNPV--ETRPSQPHVTMPPKKSSEP 985 >AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical protein Y23H5A.2 protein. Length = 197 Score = 29.5 bits (63), Expect = 1.5 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 110 KLTTQNISTQASYALTQLGKKNHSPPVRINGSLKPSISLEATTNTRALVKLGNRCSF 280 K++ N + ++ K+ PPVR+ S P +T+N R L+ L +R F Sbjct: 18 KISRPNQQMRLPIIRPKIPPKSSGPPVRLITSATPQPIAPSTSNPRPLISLLDRTEF 74 >AF016669-3|AAB66097.1| 275|Caenorhabditis elegans Hypothetical protein K10G6.2 protein. Length = 275 Score = 29.5 bits (63), Expect = 1.5 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 259 VRQQVQFYENHGDICITTSRVPSCQSHCRAGD 354 +R+Q +F+E G T + SC SHC+ D Sbjct: 103 IRRQTKFWEGAGVPKATIQAMSSCYSHCKETD 134 >Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein H02I12.1 protein. Length = 1319 Score = 29.1 bits (62), Expect = 2.0 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 73 PKTQELKALATQ--QAYYPEYKYTSILRSDPTWQEESQSSGEDQWQSETVYKSRSYDKHK 246 PK +K T Q+ + + K + R++ Q G + ++ + S ++++ Sbjct: 1164 PKNPSIKKYYTSNDQSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLT 1223 Query: 247 GACEVRQQVQFYENHG 294 G C+ Q+V ENHG Sbjct: 1224 GKCDYPQKVSGCENHG 1239 >Z66560-3|CAA91451.2| 265|Caenorhabditis elegans Hypothetical protein D1053.3 protein. Length = 265 Score = 29.1 bits (62), Expect = 2.0 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 164 GKKNHSPPVRINGSLKPSISLEATTNTRALVK-LGNRCSFMRTTAISVSQLRE 319 G K H +I L +IS L + LG+RCSFM+ ++ S S ++ Sbjct: 145 GMKRHYSMEQIRKGLDDNISTSVADQGEQLAQELGSRCSFMQISSSSSSDAKK 197 >AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode astacin protease protein32 protein. Length = 651 Score = 28.3 bits (60), Expect = 3.5 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +1 Query: 94 ALATQQAYYPEYKYTSILRSDPTWQEESQSSGEDQWQSETVYKSRSYDKHKGACEVRQQV 273 AL T++ +Y S L + TWQ+E+ + G S T S Y H V +Q+ Sbjct: 424 ALCTERT---DYGCGSTLTATDTWQQETYTFGNAS-NSATARPSAVYCNHWIQAPVGKQI 479 Query: 274 QF 279 QF Sbjct: 480 QF 481 >AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin structural genes (yolk protein genes) protein 3 protein. Length = 1603 Score = 28.3 bits (60), Expect = 3.5 Identities = 19/114 (16%), Positives = 49/114 (42%), Gaps = 2/114 (1%) Frame = +1 Query: 163 WQEESQSSGEDQWQSETVYKSRSYDKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHC 342 W E + S + S + Y++ +YD+ + ++ ++ E +C + V C+ Sbjct: 1491 WNREEKKS---DYVSSSDYEN-NYDEKETENQLFKKTLIKEFSNRVCFSIEPVSECRRGL 1546 Query: 343 RAGDYKIQHVQVTCKSKLDHDFRMYKEQIKKGQNPEVSGIP--SVKQFKVPVTC 498 + + ++ TC + + R + ++ ++ ++ P V+ K+P C Sbjct: 1547 ESEKTSNEKIRFTCMPRHSKNARRFLKEAREQTVADLVDFPVSFVESVKIPTAC 1600 >Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical protein F02H6.4 protein. Length = 425 Score = 27.9 bits (59), Expect = 4.7 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +1 Query: 385 KSKLDHDFRMYKEQIKKGQNPEVSGIPSVKQFK 483 + KL HD +M K IK Q+ SG+ +K+++ Sbjct: 279 RKKLAHDTKMLKFYIKLTQSMHDSGVSRIKEYQ 311 >Z92824-7|CAB07310.1| 156|Caenorhabditis elegans B0413.7 protein. Length = 156 Score = 27.5 bits (58), Expect = 6.2 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 49 SLNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQ 180 +L E +P L T+ A++P K SI+ TW ESQ Sbjct: 28 NLAENPENPVDLSEXPLETKPAWFPSSKGRSIVWEHXTWVAESQ 71 >U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than wild-typeprotein 6 protein. Length = 1254 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/55 (23%), Positives = 25/55 (45%) Frame = +2 Query: 287 TTAISVSQLRECPRVSRIAVLETTKYSTFK*RVNRNSTTTSACTKNRSKRARTPR 451 TT + + E + V++TT +T K +TTT+ T+ + + T + Sbjct: 787 TTTVVAENIDEVTTTEKEKVVQTTPITTEKSTTQEETTTTTTTTEKTTSKTTTEK 841 >U64609-8|AAB04605.2| 465|Caenorhabditis elegans Hypothetical protein T28H11.8 protein. Length = 465 Score = 27.5 bits (58), Expect = 6.2 Identities = 16/71 (22%), Positives = 30/71 (42%) Frame = -1 Query: 494 VTGTLNCLTLGIPDTSGFWPFLICSLYMRKSWSSFDLHVT*TCCIL*SPARQCD*HEGTL 315 + L+ + + D+ GFWP L+C + + +S LH T + +P + + Sbjct: 94 IMSALSSILYPLFDSLGFWPALVCRFFAGFAQAS-QLHFTNDLVLRWTPESEASFFFSIM 152 Query: 314 EVVIQISPWFS 282 Q P F+ Sbjct: 153 LATSQFGPLFT 163 >AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical protein Y97E10B.1 protein. Length = 588 Score = 27.5 bits (58), Expect = 6.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 49 SLNEENSDPKTQELKALATQQAYYPEYKYT 138 SL+ +S K +ELKA T YYP K T Sbjct: 40 SLSTISSQNKKRELKAFITSAYYYPTSKST 69 >AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical protein Y17G9B.1 protein. Length = 480 Score = 27.5 bits (58), Expect = 6.2 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 419 KNRSKRARTPRYLEYLASSNSKYR*LASLKY 511 KNR K A PR+ E+L N KY+ S+K+ Sbjct: 216 KNRYKSATDPRFREFL-KENIKYKVKQSIKH 245 >Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical protein F15D3.2 protein. Length = 376 Score = 27.1 bits (57), Expect = 8.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +1 Query: 52 LNEENSDPKTQELKALATQQAYYPEYKYTSILRSDPTWQEESQSSGEDQWQ 204 +NE + + + L T + + P YKY L + + + Q+SGE+Q Q Sbjct: 260 VNEYSREKHDFVMAILKTYKEFQPTYKYHIGLNGNCSLWKWDQASGEEQVQ 310 >Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical protein M163.5 protein. Length = 435 Score = 27.1 bits (57), Expect = 8.1 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +2 Query: 206 LKPSISLEATTNTRALVKLGNRCSFMRTTAISVSQLRECPRVSRIAVLETTKYSTFK*RV 385 +KP +++E +++ L + N R I +EC + I ++ YS+F + Sbjct: 216 IKPPLNIEPLSSSILLPPILNSAD-NRAQEIESKPEKECQKP--IPTSQSANYSSFNRHL 272 Query: 386 NRNSTTT 406 N+NST + Sbjct: 273 NKNSTNS 279 >Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical protein T09B9.4 protein. Length = 528 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 109 QAYYPEYKYTSILRSDPTWQEESQSSG 189 Q YPE+ Y +L PTW E + S+G Sbjct: 91 QMRYPEF-YQFLLAEQPTWFEPAPSNG 116 >U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical protein T12A2.5 protein. Length = 994 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -3 Query: 411 AEVVVEFRFTRHLNVLYFVVSSTAMRLTRGHSRSCDTDIAVVL 283 AE + + + LNVLYF ++ + LT G +++ DT ++L Sbjct: 533 AEALADLNQIKDLNVLYFYIALDELYLTGGFAKT-DTINNIIL 574 >AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical protein Y57A10A.18a protein. Length = 1456 Score = 27.1 bits (57), Expect = 8.1 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 1/132 (0%) Frame = +1 Query: 58 EENSDPKTQELKALATQ-QAYYPEYKYTSILRSDPTWQEESQSSGEDQWQSETVYKSRSY 234 ++ + P+ L++ ++Q Q + + S+ S T+Q++ Q + +T R Y Sbjct: 1309 QQQAPPQPSYLRSQSSQSQPQQQQQQQASMSMSQATYQQQHQQQNQMHHHHQTSRMQRGY 1368 Query: 235 DKHKGACEVRQQVQFYENHGDICITTSRVPSCQSHCRAGDYKIQHVQVTCKSKLDHDFRM 414 A QQ Q + D +R+ + Q H AGD + H+ Sbjct: 1369 GDLWNAAPGMQQQQQNSSQQDY---PNRMMAPQ-HNGAGDLASSQGFSMGQQSPWHNPPT 1424 Query: 415 YKEQIKKGQNPE 450 ++Q++ GQ P+ Sbjct: 1425 QQQQLRGGQAPQ 1436 >AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acetylcholinesterase protein2 protein. Length = 629 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 Query: 205 TAIDPHRRTVILLAKLGQSVGCLCTYILGSKLVV 104 +A DPH R +I +S+ Y GSKLV+ Sbjct: 384 SAEDPHNRALITRDHYEESMRAFMPYFAGSKLVL 417 >AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholinesterase protein. Length = 629 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 Query: 205 TAIDPHRRTVILLAKLGQSVGCLCTYILGSKLVV 104 +A DPH R +I +S+ Y GSKLV+ Sbjct: 384 SAEDPHNRALITRDHYEESMRAFMPYFAGSKLVL 417 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.316 0.130 0.396 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,419,841 Number of Sequences: 27780 Number of extensions: 262988 Number of successful extensions: 847 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 847 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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