Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311E07f
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 97 5e-21
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 93 9e-20
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 88 2e-18
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 85 2e-17
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 85 2e-17
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 80 6e-16
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 44 5e-05
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 44 5e-05
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 42 3e-04
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 37 0.008
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 35 0.024
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 34 0.056
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 34 0.056
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 34 0.056
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 1.6
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 1.6
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 2.8
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 97.1 bits (231), Expect = 5e-21
Identities = 48/98 (48%), Positives = 65/98 (66%)
Frame = +1
Query: 34 IKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFK 213
+ EFVG ++K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVG-RWKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 214 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 327
T + FK G+EF+E DG VKSV FE +QK
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 93.1 bits (221), Expect = 9e-20
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +1
Query: 43 EFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTE 222
+F+G ++K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ ++ STFK T+
Sbjct: 6 DFIG-RWKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 223 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYVREFGPEEMKAVMT-- 396
+ FK GEEF E+ D S+ TFE L Q + V E K + T
Sbjct: 65 LSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQ 124
Query: 397 AKDVTCXRVYK 429
+ DV C R ++
Sbjct: 125 SGDVICRREWE 135
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 88.2 bits (209), Expect = 2e-18
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +1
Query: 43 EFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTE 222
+FVG ++K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++ + STFK T
Sbjct: 5 QFVG-RWKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 223 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK--XPDGLEVTYVREFGPEEMKAVMT 396
++F G EF+E DG + KS T E + VQK + R F E++ +
Sbjct: 64 LEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQ 123
Query: 397 AKDVTCXRVY 426
+ V R Y
Sbjct: 124 SGSVISRRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 85.4 bits (202), Expect = 2e-17
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = +1
Query: 34 IKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFK 213
I+ + VG K+ SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVG-KWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 214 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYVREFGPE-EMKAV 390
+K+K G +E ADG V SV + E + L Q++ G + + + + ++ V
Sbjct: 62 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIV 121
Query: 391 MTAKDVTCXRVYK 429
T V C RVY+
Sbjct: 122 CTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 85.4 bits (202), Expect = 2e-17
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = +1
Query: 34 IKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFK 213
I+ + VG K+ SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVG-KWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 214 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYVREFGPE-EMKAV 390
+K+K G +E ADG V SV + E + L Q++ G + + + + ++ V
Sbjct: 77 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIV 136
Query: 391 MTAKDVTCXRVYK 429
T V C RVY+
Sbjct: 137 CTCNGVKCTRVYE 149
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 80.2 bits (189), Expect = 6e-16
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = +1
Query: 43 EFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTE 222
EF+G ++K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD + STFK +
Sbjct: 6 EFIG-RWKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 223 MKFKPGEEFEEDRADGAKVKSVCTFE 300
+ FK E+F E D ++ TFE
Sbjct: 65 LAFKIREKFVEIAPDERSYNTLVTFE 90
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 44.0 bits (99), Expect = 5e-05
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Frame = +1
Query: 34 IKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYDLVTSST 207
I +F G KY + SENFDEF+ GV R+ + L K+ +Y++ ++
Sbjct: 8 IPEKFFG-KYDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 208 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KXPDGLEVTYVREFGPE 375
K T ++ G+ FE + DG K +F+ L + P+ TY +
Sbjct: 67 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIEND 126
Query: 376 EMKAVMTAKDVTCXRVYK 429
++ M +TC R +K
Sbjct: 127 QLVMKMVNNGITCRRWFK 144
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 44.0 bits (99), Expect = 5e-05
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Frame = +1
Query: 34 IKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYDLVTSST 207
I +F G KY + SENFDEF+ GV R+ + L K+ +Y++ ++
Sbjct: 23 IPEKFFG-KYDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 208 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KXPDGLEVTYVREFGPE 375
K T ++ G+ FE + DG K +F+ L + P+ TY +
Sbjct: 82 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIEND 141
Query: 376 EMKAVMTAKDVTCXRVYK 429
++ M +TC R +K
Sbjct: 142 QLVMKMVNNGITCRRWFK 159
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 41.5 bits (93), Expect = 3e-04
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 31 SIKMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYDLVTSS 204
S+ +F G +Y++ SENFDEF+ + GV R+ +T + ++ +Y++ +
Sbjct: 2 SVPDKFFG-RYQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 205 TFKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KXPDGLEVTYVREFGP 372
+ K T + ++ G++FE DG + + F+ L + P+ TY
Sbjct: 61 SKKNTNYQAWELGKKFEAPGLDGNQHEITFDFKDEILSEHHIRLNEPETSAETYFYTIDD 120
Query: 373 EEMKAV-MTAKDVTCXRVYK 429
+ + M + C R +K
Sbjct: 121 QNQLVMRMENNGIVCRRWFK 140
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 36.7 bits (81), Expect = 0.008
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = +1
Query: 61 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDE--YDLVTSSTFKTTEMK-F 231
+ + SENFDE++ G G TRK T K ++ +D ++ K K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 232 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDG---LEVTYVREFGPEEMKAVMTAK 402
+ G+ F+ + D K + T + L + K +G E TY F E + M+
Sbjct: 88 QLGKAFQGEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFN 147
Query: 403 DVTCXRVYK 429
V R YK
Sbjct: 148 GVEGRRFYK 156
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 35.1 bits (77), Expect = 0.024
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Frame = +1
Query: 61 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDE--YDLVTSSTFKTTEMK-F 231
+ + SENFDE++ G G TRK T K+ ++ +D ++ K K
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANKNLFDYSNLTSKKDVFYKNV 89
Query: 232 KPGEEFEEDRADGAKVKSVCTF-EGNTLKQVQKXPDG--LEVTYVREFGPEEMKAVMTAK 402
+ G +FE + D K + T +G+ + + +G E TY F + + M+
Sbjct: 90 QIGSKFEGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSFN 149
Query: 403 DVTCXRVYK 429
++ R YK
Sbjct: 150 NIEGRRFYK 158
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 33.9 bits (74), Expect = 0.056
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 73 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKP 237
SSE ++ + IGV L RK +A P DG+ + V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 33.9 bits (74), Expect = 0.056
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 73 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKP 237
SSE ++ + IGV L RK +A P DG+ + V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 33.9 bits (74), Expect = 0.056
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 73 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKP 237
SSE ++ + IGV L RK +A P DG+ + V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 37 KMEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSST 207
++ +G +Y +TS +F ++T+G+G ++ + LR+ YD+ TSST
Sbjct: 1170 RLSTLGRQYSLTSIGSFSS-IRTVGLGSRKDSISDMTSSMYSLRRRDSTYDM-TSST 1224
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 127 RKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKPGEEFEE 255
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 227 FISVVLKVEEVTKSYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 87
F S++ K VT + S +L SST + +A+ I PT +F NSS
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 203 EEVTKSYSSPSLRSSTVGVTALAA 132
EE+TK P+ +++TV ALAA
Sbjct: 157 EEITKGEQKPAAKAATVDTVALAA 180
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +1
Query: 97 MKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKPGEEFEEDRADGAK 276
+K + G I +K + P + + +DG Y K ++FK E FE+ +
Sbjct: 241 IKVLPAGKIEKKLIKELNPEMMVGRDGRRYRQKLREAEKQATVEFKL-ENFEQTNGEAQS 299
Query: 277 VKS 285
V++
Sbjct: 300 VEN 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,461,560
Number of Sequences: 27780
Number of extensions: 179402
Number of successful extensions: 522
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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