Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E07f
         (453 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...   154   4e-40
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    67   7e-14
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    55   3e-10
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.1  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   2.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   2.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   2.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   6.3  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score =  154 bits (374), Expect = 4e-40
 Identities = 73/131 (55%), Positives = 94/131 (71%)
 Frame = +1

Query: 43  EFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTE 222
           +F+G +YK+ SSENFD+FMK +GVG++TRK  ++V+P VEL ++   Y L T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 223 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYVREFGPEEMKAVMTAK 402
           +KFK GEEFEE+  DG KVKSVCT +GN L QVQK     + T  REF   EMKA+M   
Sbjct: 63  IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVD 120

Query: 403 DVTCXRVYKVQ 435
           D+ C RVYK+Q
Sbjct: 121 DIICTRVYKIQ 131


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 67.3 bits (157), Expect = 7e-14
 Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
 Frame = +1

Query: 40  MEFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTT 219
           ++F G K++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS   T 
Sbjct: 2   VQFEG-KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59

Query: 220 EMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYVREFGPEEMKA-V 390
              FK    FEE        K ++V + EGNT K   +  D L+VT + EF   E+   +
Sbjct: 60  TKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHI 119

Query: 391 MTAK-DVTCXRVYK 429
            T K DV   RVYK
Sbjct: 120 STNKSDVKATRVYK 133


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 55.2 bits (127), Expect = 3e-10
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
 Frame = +1

Query: 43  EFVGXKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTE 222
           +F G K++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS   T  
Sbjct: 1   QFEG-KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58

Query: 223 MKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKXPDGLEVT 351
             FK    FEE        K ++V + EGNT K   +  D L+VT
Sbjct: 59  KTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 97  MKTIGVGLITRKAANAVTPTVELRKDGDEYD 189
           MKTI  G    +    V    E  K G EYD
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 289 CTFEGNTLKQVQKXPDGL 342
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 289 CTFEGNTLKQVQKXPDGL 342
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 289 CTFEGNTLKQVQKXPDGL 342
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 227 FISVVLKVEEVTKSYSSPSLRSSTV 153
           FIS+++  +E+    +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,695
Number of Sequences: 438
Number of extensions: 2077
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)