Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311E07f
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g38720.1 68418.m04683 expressed protein predicted protein, Dr... 28 2.6
At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to... 27 4.5
At1g27040.2 68414.m03296 nitrate transporter, putative contains ... 27 4.5
At1g27040.1 68414.m03297 nitrate transporter, putative contains ... 27 4.5
At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1) domain... 27 5.9
At3g19890.1 68416.m02518 F-box family protein contains F-box dom... 27 5.9
At4g03480.1 68417.m00475 ankyrin repeat family protein contains ... 27 7.8
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 7.8
At2g17550.1 68415.m02031 expressed protein 27 7.8
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 27 7.8
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 27 7.8
>At5g38720.1 68418.m04683 expressed protein predicted protein,
Drosophila melanogaster
Length = 306
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 112 VGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKPGEEFEEDRADG 270
VG ++ N VEL +D L S+ K K + G+E + ADG
Sbjct: 18 VGKKIQRKKNEKVSNVELSEDPQAAQLQAKSSEKPNRKKIQKGKEIKSSPADG 70
>At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to
nitrate transporter (NTL1) GI:3377517 [Arabidopsis
thaliana]
Length = 585
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 64 KMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDG 177
K T +E ++ IGVGL+ A AV VE+++ G
Sbjct: 414 KATKTETGVTHLQRIGVGLVLSILAMAVAALVEIKRKG 451
>At1g27040.2 68414.m03296 nitrate transporter, putative contains
Pfam profile: PF00854 POT family; similar to nitrate
transporter (NTL1) GI:3377517 [Arabidopsis thaliana]
Length = 563
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 64 KMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRK 171
K+T SE ++ IGVGL+ A AV VEL++
Sbjct: 393 KVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKR 428
>At1g27040.1 68414.m03297 nitrate transporter, putative contains
Pfam profile: PF00854 POT family; similar to nitrate
transporter (NTL1) GI:3377517 [Arabidopsis thaliana]
Length = 567
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 64 KMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRK 171
K+T SE ++ IGVGL+ A AV VEL++
Sbjct: 397 KVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKR 432
>At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein predicted proteins,
Arabidopsis thaliana and Drosophila melanogaster
contains Pfam profile PF00564: PB1 domain
Length = 531
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 178 DEYDLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEVTYV 357
+ Y S+ ++ +++F+ +E+ + KVK +C++ G ++Q P ++TYV
Sbjct: 7 NSYPDSAESSPRSRDVEFENPSPWEDQQQQNYKVKLMCSYGG----KIQPRPHDNQLTYV 62
>At3g19890.1 68416.m02518 F-box family protein contains F-box domain
Pfam:PF00646
Length = 410
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 157 VELRKDGDEYDLVTSSTFKTTEMKFKPGEEFEEDRADGAKV 279
VE+RKD LV SS++ + K EE EED+ K+
Sbjct: 354 VEVRKDVYRSALVCSSSYVPSLEKINQIEEEEEDKCKSIKM 394
>At4g03480.1 68417.m00475 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 617
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 282 IRMHIRRQHPQASPEGPRRS*SHLRQGIRP 371
+R H+ R P+ASP P S S+ R + P
Sbjct: 2 VRSHLLRATPEASPLKPASSPSNCRLSLSP 31
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 26.6 bits (56), Expect = 7.8
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +1
Query: 172 DGDEYDLVTSSTFKTTEM-KFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKXPDGLEV 348
DG E F E+ + P E D D + CTF+G +K D L +
Sbjct: 156 DGSEKQYDILPDFSPAEVAELWPAFSGEHDNMDAQSLVK-CTFQGGRCSNEEKPVDRLLI 214
Query: 349 TYVREFGPEEMKAVMTAK 402
T + E +++A K
Sbjct: 215 TLMSECIESDVQAQSVVK 232
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/85 (18%), Positives = 33/85 (38%)
Frame = +1
Query: 73 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYDLVTSSTFKTTEMKFKPGEEFE 252
+ + F + + + G + + N R G ++ L + T T + +PG +
Sbjct: 178 ADKRFKDCSRIVDSGCVVARDENKERLFTRTRSFGRDFTLKSDRTAPTRIVVLRPGLQRA 237
Query: 253 EDRADGAKVKSVCTFEGNTLKQVQK 327
D D S T EG+ +++
Sbjct: 238 YDYEDSLTTSSGTTMEGSRGSSIEE 262
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 26.6 bits (56), Expect = 7.8
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 175 GDEYDLVTSSTFKTTEMKFKP-----GEEFEEDRADGAKVKSVCTFEGNTLKQV 321
G E ++VTS TFKT + +P GE FE + DG K+ G+ + Q+
Sbjct: 575 GVEAEVVTSLTFKTNKRTSQPFGMTAGEHFELNE-DGYKIVGFHGKAGDLVHQI 627
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 26.6 bits (56), Expect = 7.8
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 175 GDEYDLVTSSTFKTTEMKFKP-----GEEFEEDRADGAKVKSVCTFEGNTLKQV 321
G E ++VTS TFKT + +P GE FE + DG K+ G+ + Q+
Sbjct: 575 GVEAEVVTSLTFKTNKRTSQPFGMTAGEHFELNE-DGYKIVGFHGKAGDLVHQI 627
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,068,623
Number of Sequences: 28952
Number of extensions: 173998
Number of successful extensions: 535
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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