Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    26   0.27 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.4  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 269 QGSYSLVEPDGTRRVVDYAADSINGF 346
           QGS S   PDG +  + Y AD  NGF
Sbjct: 72  QGSDSYTAPDGQQVSITYVADE-NGF 96


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 1   RIRHEARTQLNNHSNGPQVG 60
           RI H+A  ++ NH +G  +G
Sbjct: 512 RIHHDAEWKVGNHEDGYLIG 531


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 1   RIRHEARTQLNNHSNGPQVG 60
           RI H+A  ++ NH +G  +G
Sbjct: 427 RIHHDAEWKVGNHEDGYLIG 446


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 1   RIRHEARTQLNNHSNGPQVG 60
           RI H+A  ++ NH +G  +G
Sbjct: 746 RIHHDAEWKVGNHEDGYLIG 765


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,866
Number of Sequences: 438
Number of extensions: 1611
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)