Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311E04f
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   134   3e-32
Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical ...    28   3.2  
U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell l...    27   4.2  
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    27   7.3  
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical...    27   7.3  
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ...    27   7.3  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    27   7.3  
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical...    27   7.3  
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ...    27   7.3  
AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical...    26   9.7  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  134 bits (323), Expect = 3e-32
 Identities = 62/101 (61%), Positives = 76/101 (75%)
 Frame = +1

Query: 1   DRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVS 180
           DRLQTGMRGA+GKPQG VARV IG  + S+R  +      IEA RRAKFKFPGRQ I  S
Sbjct: 109 DRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSS 168

Query: 181 KKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAW 303
           +KWGFTK++R+++E++R EGRL +DG  VQ + EHGPL  W
Sbjct: 169 RKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREHGPLTKW 209


>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 22  RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 168
           R   GKP   +A+   G+ I  + + D W  + +    +   K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278


>AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical
           protein C29F9.4 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 193 FTKYERDEFEKLREEGRLANDGCIVQYR 276
           F K +RDEFE++R +  LA +  I  Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163


>U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell
           lineage protein 32 protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 62  FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKR 169
           F+LDSP+ P +L  GG     + C    + SP + R
Sbjct: 36  FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLR 71


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6a protein.
          Length = 1247

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6b protein.
          Length = 1245

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6a protein.
          Length = 1247

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6b protein.
          Length = 1245

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 104  LSLERTDMMGCPMRTRATVP*GLPNAPRIP 15
            L++E TD++G P RT+A +     N+  IP
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIP 991


>AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical
           protein F56C3.2 protein.
          Length = 457

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 127 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFE 222
           + + AKF+FP  +   +S+ +    Y+++EFE
Sbjct: 394 SFQEAKFQFPRIELHQISELFNLGTYQKEEFE 425


>AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical
           protein Y94H6A.1 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 187 WGFTKYERDEFEKLREEGRL 246
           +GF K +R+EFE   E+G++
Sbjct: 309 YGFLKIQREEFENCPEDGQI 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,331,637
Number of Sequences: 27780
Number of extensions: 209705
Number of successful extensions: 541
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)