BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS311D12f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 249 9e-67 03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 248 2e-66 05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 241 3e-64 10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.56 05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.74 07_03_1509 - 27246721-27247350 29 1.7 09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 4.0 12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 6.9 09_06_0319 - 22293869-22293906,22294539-22295808 27 6.9 08_02_0567 + 18769742-18769790,18769928-18771351 27 6.9 06_02_0084 - 11547820-11548773 27 6.9 11_01_0053 - 401578-401824,401996-402079,402201-402388,402713-40... 27 9.1 05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 27 9.1 02_03_0106 + 15292869-15296138 27 9.1 01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 27 9.1 >11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496, 6245741-6245821 Length = 224 Score = 249 bits (610), Expect = 9e-67 Identities = 116/173 (67%), Positives = 136/173 (78%) Frame = +1 Query: 1 IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180 IRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ KN GKD FH+R+R Sbjct: 31 IRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVR 90 Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360 +HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR + E Sbjct: 91 VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEE 150 Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519 ALRRAKFKFPGRQKI S+KWGFTK+ R+E+ KL+ EGR+ +DG Q H Sbjct: 151 ALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSH 203 >03_02_0897 - 12239375-12239458,12240035-12240116,12240213-12240714, 12241150-12241303,12241458-12241629,12242237-12242443, 12242926-12243323 Length = 532 Score = 248 bits (607), Expect = 2e-66 Identities = 114/173 (65%), Positives = 136/173 (78%) Frame = +1 Query: 1 IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180 IRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R+ Sbjct: 338 IRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLRVC 397 Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360 HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A E Sbjct: 398 AHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHAQE 457 Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519 ALRRAKFKFPGRQ++ S KWGFT+++RDE+ KL+ EGR+ DG + H Sbjct: 458 ALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAKLLTRH 510 >05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522, 4086671-4087357,4087555-4087813,4088435-4088558, 4089474-4089564 Length = 580 Score = 241 bits (589), Expect = 3e-64 Identities = 111/164 (67%), Positives = 131/164 (79%) Frame = +1 Query: 1 IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180 IRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K+ GKD FH+R+R Sbjct: 27 IRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVR 86 Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360 +HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR E Sbjct: 87 VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASE 146 Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDG 492 ALRRAKFKFPGRQKI S+KWGFTK+ RDE+ +L+ EGR+ DG Sbjct: 147 ALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190 >10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006, 15160067-15160182,15160358-15160399,15161026-15161442, 15162356-15162509,15162911-15162975,15163793-15163870, 15163951-15164061,15164227-15164271,15164677-15164850, 15165383-15166335,15166471-15166681,15167037-15167196, 15168786-15169174 Length = 1072 Score = 31.1 bits (67), Expect = 0.56 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +1 Query: 34 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 153 T D P C +HL SD Y S E ++AG+ C L K G Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627 >05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613, 2879715-2879973,2880060-2880346,2880423-2880758, 2880862-2881003,2881077-2881297,2881379-2881540, 2881617-2881775,2881860-2882159,2882834-2883097, 2883133-2883243,2883902-2883988 Length = 1871 Score = 30.7 bits (66), Expect = 0.74 Identities = 10/31 (32%), Positives = 21/31 (67%) Frame = -1 Query: 314 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 222 + CP+ + + VP LP++P P++S ++P + Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655 >07_03_1509 - 27246721-27247350 Length = 209 Score = 29.5 bits (63), Expect = 1.7 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +2 Query: 302 LDSPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 430 L P PC RH RL +P +SSSP+++R+T R+G S Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179 >09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747, 22300591-22300660,22301632-22301726,22301917-22302048, 22302154-22302222,22302953-22303051,22303169-22303253, 22303353-22303453,22303660-22303728,22303861-22303901, 22304085-22304303,22304444-22304470,22304562-22304660, 22304898-22305106,22305382-22305485,22305753-22305894, 22305991-22306289,22306508-22306903 Length = 1229 Score = 28.3 bits (60), Expect = 4.0 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +1 Query: 268 GKPQGTVARVRIGQPIMSVRSSD 336 G PQ T+ R+ +G P +S++S+D Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111 >12_02_0957 + 24807261-24807311,24807436-24807773,24808727-24808927, 24809024-24809069,24809284-24809600,24809949-24810072, 24810465-24810537,24810968-24811173,24811384-24811651, 24811780-24811877,24812116-24812379 Length = 661 Score = 27.5 bits (58), Expect = 6.9 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -1 Query: 140 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 39 +R+ ++ P+ ELSC ++T C H G S Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118 >09_06_0319 - 22293869-22293906,22294539-22295808 Length = 435 Score = 27.5 bits (58), Expect = 6.9 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 268 GKPQGTVARVRIGQPIMSVRSSD 336 G PQ T+ R+ +G P +S+ S D Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365 >08_02_0567 + 18769742-18769790,18769928-18771351 Length = 490 Score = 27.5 bits (58), Expect = 6.9 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Frame = +1 Query: 253 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 405 MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++ Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76 >06_02_0084 - 11547820-11548773 Length = 317 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = +1 Query: 217 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 345 L G DR Q GMRGA P RVR +P R +W+ Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177 >11_01_0053 - 401578-401824,401996-402079,402201-402388,402713-402779, 402905-403105,403712-403789,404358-404374 Length = 293 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 397 QKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPE 516 +KIY S WGFT E++ + +E + I + +PE Sbjct: 2 EKIYRSHLWGFTANEKEAYSGENDERQQILQLIIEEKQPE 41 >05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253, 2972300-2972817 Length = 406 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 213 NVIMRWS**APDWDAWCVWQASGYCSTCSHWT 308 NV+ RW P AWC + S + CS W+ Sbjct: 342 NVLGRWGH-GPVPGAWCSGRKSWFSDPCSQWS 372 >02_03_0106 + 15292869-15296138 Length = 1089 Score = 27.1 bits (57), Expect = 9.1 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -1 Query: 179 LMRIWN*SFPQFFTRYLLQQIRPASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKI 6 L+ W+ +FP++ LL + R EL CS S C GK+ ++ +P+ +I Sbjct: 1008 LIIFWSIAFPRWLE--LLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRI 1063 >01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 Length = 244 Score = 27.1 bits (57), Expect = 9.1 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -3 Query: 399 LTSGELELGTAQSLDDLCLPPVTRAHGHDGLSNANTCYSTLRLAKRTTHP 250 L+SGEL +G + D+ LPPV G G S+A S + +R P Sbjct: 134 LSSGELLIGASSPYDEPPLPPVHSRRG-AGRSSAVPRLSAPDIGRRYYEP 182 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,136,262 Number of Sequences: 37544 Number of extensions: 360246 Number of successful extensions: 1041 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1013 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1040 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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