Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311D12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   342   2e-94
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   342   2e-94
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   342   2e-94
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   342   2e-94
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   232   2e-61
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    32   0.54 
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    32   0.54 

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  342 bits (841), Expect = 2e-94
 Identities = 157/173 (90%), Positives = 167/173 (96%)
 Frame = +1

Query: 1   IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
           IRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMR
Sbjct: 31  IRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMR 90

Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
           LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIE
Sbjct: 91  LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIE 150

Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
           ALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEH
Sbjct: 151 ALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEH 203


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  342 bits (841), Expect = 2e-94
 Identities = 157/173 (90%), Positives = 167/173 (96%)
 Frame = +1

Query: 1   IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
           IRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMR
Sbjct: 31  IRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMR 90

Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
           LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIE
Sbjct: 91  LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIE 150

Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
           ALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEH
Sbjct: 151 ALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEH 203


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  342 bits (841), Expect = 2e-94
 Identities = 157/173 (90%), Positives = 167/173 (96%)
 Frame = +1

Query: 1   IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
           IRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMR
Sbjct: 44  IRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMR 103

Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
           LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIE
Sbjct: 104 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIE 163

Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
           ALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEH
Sbjct: 164 ALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEH 216


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  342 bits (841), Expect = 2e-94
 Identities = 157/173 (90%), Positives = 167/173 (96%)
 Frame = +1

Query: 1   IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
           IRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMR
Sbjct: 50  IRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMR 109

Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
           LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIE
Sbjct: 110 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIE 169

Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
           ALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEH
Sbjct: 170 ALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEH 222


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  232 bits (568), Expect = 2e-61
 Identities = 120/173 (69%), Positives = 133/173 (76%)
 Frame = +1

Query: 1   IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
           IRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEAGRICCNK ++   G D+    MR
Sbjct: 37  IRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNK-MLSCAGADRLQTGMR 95

Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
                                     GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIE
Sbjct: 96  --------------------------GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIE 129

Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
           ALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEH
Sbjct: 130 ALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEH 182


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 320 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 496
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 497 LCSTA 511
           L  TA
Sbjct: 355 LAKTA 359


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 320 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 496
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 497 LCSTA 511
           L  TA
Sbjct: 355 LAKTA 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,270,162
Number of Sequences: 53049
Number of extensions: 579578
Number of successful extensions: 1929
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)