Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311D12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 256 5e-69
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 4.7
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 27 6.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 256 bits (628), Expect = 5e-69
Identities = 119/173 (68%), Positives = 139/173 (80%)
Frame = +1
Query: 1 IRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 180
IRIFDLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGKD FH+R+R
Sbjct: 31 IRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVR 90
Query: 181 LHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE 360
HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG + S+R + IE
Sbjct: 91 KHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIE 150
Query: 361 ALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 519
A RRAKFKFPGRQ I S+KWGFTK++R+++E++R EGRL +DG VQ + EH
Sbjct: 151 AFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREH 203
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 345 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 223
+P VT A + LSN T ST LA T +L P+S A
Sbjct: 46 VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 256 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 402
R GKP +A+ G+ I + + D W + + + K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 275 GLPNAPRIPVWSLSAPA 225
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 427 FTKYERDEFEKLREEGRLANDGCIVQYR 510
F K +RDEFE++R + LA + I Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 296 FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKR 403
F+LDSP+ P +L GG + C + SP + R
Sbjct: 36 FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLR 71
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 196 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 20
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 19 PNRR 8
+++
Sbjct: 1937 HHQK 1940
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 196 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 20
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 700 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 757
Query: 19 PNRR 8
+++
Sbjct: 758 HHQK 761
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 196 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 20
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 19 PNRR 8
+++
Sbjct: 1937 HHQK 1940
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,100,574
Number of Sequences: 27780
Number of extensions: 285717
Number of successful extensions: 825
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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