Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311D07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 31 0.38
U22832-2|AAA64509.2| 571|Caenorhabditis elegans Hypothetical pr... 31 0.38
U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 28 4.7
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 27 6.2
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 27 8.1
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 27 8.1
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 27 8.1
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 8.1
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 8.1
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 27 8.1
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 27 8.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +2
Query: 230 TKPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDGDK-GCTFEEI 406
T P EP ++ + + T KAI+ TP P + I +E+ K T E +
Sbjct: 130 TAPQEPKRQRKALEIVDPTTKKAIEVTPHLAPAAPAPAAPAAPIAPEEEKKKQNITLEFL 189
Query: 407 EFTKPK-HYDNYQRDLFDFIPLSEPCHLKQLSPP--STPPP 520
K + H+++ + D +P + P ++ P S PPP
Sbjct: 190 NQVKNELHHEDRRHDNPPAVPAAVPAAVQAAVLPNFSVPPP 230
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +2
Query: 230 TKPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDGDK-GCTFEEI 406
T P EP ++ + + T KAI+ TP P + I +E+ K T E +
Sbjct: 130 TAPQEPKRQRKALEIVDPTTKKAIEVTPHLAPAAPAPAAPAAPIAPEEEKKKQNITLEFL 189
Query: 407 EFTKPK-HYDNYQRDLFDFIPLSEPCHLKQLSPP--STPPP 520
K + H+++ + D +P + P ++ P S PPP
Sbjct: 190 NQVKNELHHEDRRHDNPPAVPAAVPAAVQAAVLPNFSVPPP 230
>U22832-2|AAA64509.2| 571|Caenorhabditis elegans Hypothetical
protein C09F5.1 protein.
Length = 571
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +2
Query: 164 KNVSRQP--LHNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQSTP--SRKVFT 331
++VSR+P LH N G+ + P G T SFL+ +G + S P R T
Sbjct: 61 RDVSREPSFLHTSANYGQHIETSPPPVQRYNVSGATNSSFLNTSGDSRVSYPGADRSNDT 120
Query: 332 PRAVNVGSLIYTDEDGDKGCTFEEIEFTKP 421
N G I+ D G E + P
Sbjct: 121 TVINNYGYDIHEVRTDDGGARIIETHGSGP 150
>U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical
protein C03G6.10 protein.
Length = 370
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +2
Query: 65 DDIEKISLSKLTFDLATMSLFDIFGDHLTRQAVKNVSRQPLHNIENMGKVVSAGPTKPNE 244
+ + K ++ L + + F + D+ QAV ++ L+N N+G GPT N
Sbjct: 97 ETMTKNTIDALVYLEEKLEKFRLSADNPHWQAVSDLELY-LNNGSNLGLADKFGPTFENS 155
Query: 245 PTKKGETKKSFLSNTGKAIQST-----PSRKVFT 331
+ E K S L ++ KA+Q+ P++K++T
Sbjct: 156 VHESFEPKNS-LPSSLKAVQNNKLNHCPTKKIWT 188
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2
Query: 155 QAVKNVSRQPLHNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTP 334
Q K+V P+ K PT+P +P K E KK + Q TPS K TP
Sbjct: 1313 QRKKHVQVPPVTKTPVTPKTSIPPPTEPEKPIKPSEQKKPNAIPVERPKQPTPS-KARTP 1371
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 292 ESNSEHTIT*SVHPSCCECGFSHIY 366
E+N ++ HPS CEC F H Y
Sbjct: 225 ETNGQYDNNQEPHPSNCECVFHHDY 249
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 263 TKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIY---TDEDGDKGCTFEEIEFTKP-KHY 430
T KSF N +S+ SRK PR NV SL Y T + FE++ T+P HY
Sbjct: 1705 TMKSF--NKPPKPESSSSRKPPNPRRQNVSSLDYAGITSDTPPPMRLFEQVAQTQPTNHY 1762
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 191 NIENMGKVVSAGPTKPNEPTKKGETKKS 274
NIE +GK VS +KPN + ETK S
Sbjct: 2790 NIERIGKTVSVTLSKPNS-VETAETKSS 2816
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 191 NIENMGKVVSAGPTKPNEPTKKGETKKS 274
NIE +GK VS +KPN + ETK S
Sbjct: 2790 NIERIGKTVSVTLSKPNS-VETAETKSS 2816
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +2
Query: 188 HNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNT---GKAIQSTPSRKV--FTPRAVNVG 352
+N+EN S + ++PT + ++ S S T G Q T +R F PR+
Sbjct: 65 NNLENFWLCFSGNTSLADDPTVQSDSSASTQSRTNQSGTIAQETDNRNASNFPPRSTTRR 124
Query: 353 SLIYTDEDGDKG 388
Y D +G
Sbjct: 125 GQTYESRDESQG 136
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 286 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 345
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 346 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 383
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 290 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 349
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 350 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 387
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 348 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 407
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 408 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 445
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 306 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 365
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 366 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 403
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 314 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 373
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 374 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 411
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 286 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 345
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 346 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 383
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 290 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 349
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 350 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 387
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 348 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 407
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 408 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 445
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 306 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 365
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 366 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 403
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 314 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 373
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 374 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 411
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 191 NIENMGKVVSAGPTKPNEPTKKGETKKS 274
NIE +GK VS +KPN + ETK S
Sbjct: 604 NIERIGKTVSVTLSKPNS-VETAETKSS 630
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 161 VKNVSRQPLHNIENMGKVVSAGPTKP-NEPTKKGETKKSFLSNTGK 295
V+ VS +P H+ +MG +GP++P +EP+ + ++ S +++ K
Sbjct: 486 VEPVSVKPKHDPVSMGGRTVSGPSEPSSEPSSEPSSEPSLVASLVK 531
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 206 GKVVSAGPT-KPNEPTKKGETKKSFLS-NTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG 379
G + + GPT K T T + S G +T S K+FT + +GSL+Y G
Sbjct: 276 GTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFG 335
Query: 380 DKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSE-PCHLKQ 493
+ + + ++ Y L +FI + P L+Q
Sbjct: 336 NVSAIIQRL-YSGTARYHTEMSRLREFIRFHQIPNPLRQ 373
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 262 FPFFCWFIWFCGAC*DYFAHVFYIMQRLPGNIFHGLSSKVIS 137
F FFC+F+ F A YF + R F+ ++ K+ S
Sbjct: 91 FLFFCYFLHFGNAYFQYFMVTLMAVNRTTSIFFYFVNEKIWS 132
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 191 NIENMGKVVSAGPTKPNEPTKKGETKKS 274
NIE +GK VS +KPN + ETK S
Sbjct: 2790 NIERIGKTVSVTLSKPNS-VETAETKSS 2816
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 191 NIENMGKVVSAGPTKPNEPTKKGETKKS 274
NIE +GK VS +KPN + ETK S
Sbjct: 2790 NIERIGKTVSVTLSKPNS-VETAETKSS 2816
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,762,202
Number of Sequences: 27780
Number of extensions: 240193
Number of successful extensions: 768
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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