Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311D02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 1e-59
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 54 7e-08
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 54 7e-08
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 54 7e-08
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 54 7e-08
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 54 7e-08
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 52 2e-07
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 47 1e-05
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 46 1e-05
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 44 6e-05
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_53825| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 38 0.005
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_4878| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30) 29 1.8
SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_7597| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_30413| Best HMM Match : WSC (HMM E-Value=2.4) 28 5.4
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 28 5.4
SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_45792| Best HMM Match : RVT_1 (HMM E-Value=3.5e-26) 27 7.1
SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30) 27 7.1
SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.4
SB_34026| Best HMM Match : PLDc (HMM E-Value=0.063) 27 9.4
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 225 bits (551), Expect = 1e-59
Identities = 105/120 (87%), Positives = 115/120 (95%)
Frame = -3
Query: 444 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 265
LEEKDP+RLFEGNALLRRLVRIGVLDE + KLDYVLGL+IEDFLERRLQTQVFK GLAKS
Sbjct: 60 LEEKDPRRLFEGNALLRRLVRIGVLDESRKKLDYVLGLRIEDFLERRLQTQVFKLGLAKS 119
Query: 264 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 85
IHHAR+LIRQRHIRVRKQ+VN+PSF+VRLDS KHIDFSL SP+GGGRPGRVKRKN++KGQ
Sbjct: 120 IHHARVLIRQRHIRVRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKKGQ 179
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 4 SHDVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 60 SHDVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 628 SHDVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 39 SHDVVKRRPVNCNTTHYRANW 59
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 41 SHDVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 1879 SHDVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 39 SHDVVKRRPVNCNTTHYRANW 59
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 33 SHDVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 82 SHDVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 60 SHDVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 71 SHDVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 47 SHDVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANW 459
SHDVVKRRPVNCNTTHYRANW
Sbjct: 71 SHDVVKRRPVNCNTTHYRANW 91
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 518 HDVVKRRPVNCNTTHYRANW 459
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 518 HDVVKRRPVNCNTTHYRANW 459
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRAN 462
SHDVVKRRPVNCNTTHYRAN
Sbjct: 21 SHDVVKRRPVNCNTTHYRAN 40
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 444 GGARYPIRPIVSRITIHWPSFYNVVT 521
GGA PIRPIVS ITIHWPSFYN VT
Sbjct: 38 GGA--PIRPIVSHITIHWPSFYNGVT 61
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 444 GGARYPIRPIVSRITIHWPSFYNVVT 521
GGA PIRPIVSRITIHWP+FYN T
Sbjct: 36 GGA--PIRPIVSRITIHWPAFYNAPT 59
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRAN 462
SHD KRRPVNCNTTHYRAN
Sbjct: 78 SHDGEKRRPVNCNTTHYRAN 97
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 462 IRPIVSRITIHWPSFYNVVT 521
+RP+VSRITIHW SFYNVVT
Sbjct: 33 LRPVVSRITIHWTSFYNVVT 52
>SB_53825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = -3
Query: 444 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 265
L+ KDP R+ +L +L +G++ K+ L + F RRL + +A+
Sbjct: 64 LDPKDPYRVEATEQILEKLHNMGLISTKK-NLGQCNKVNASSFCRRRLPVVMVNLKMAQV 122
Query: 264 IHHARILIRQRHIRVRKQVVNIPSFIV 184
+ A I Q H+RV +V+ P+F+V
Sbjct: 123 VKDAVKYIEQGHVRVGPEVIMDPAFLV 149
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 432 PSPRGGARYPIRPIVSRITIHWPSFYNVVT 521
P PR + P +SRITIHWPSFYNVVT
Sbjct: 68 PPPRWSSN---SPYMSRITIHWPSFYNVVT 94
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 462 IRPIVSRITIHWPSFY 509
IRPIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVVT 521
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVV 518
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.7 bits (76), Expect = 0.047
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 477 SRITIHWPSFYNVV 518
SRITIHWPSFYNV+
Sbjct: 2 SRITIHWPSFYNVM 15
>SB_4878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 515 DVVKRRPVNCNTTHYRANWVPGPPSRRRTPRDCSK 411
+V+K+ P+ + +R +PGPP R P+ SK
Sbjct: 495 EVMKKIPIKRRSVPHRHRGIPGPPDNLRPPKKKSK 529
>SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30)
Length = 508
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 521 SHDVVKRRPVNCNTTHYRANWVPGPPSRRRTPRDCSKVMPFY 396
SHDVVKRRPV + H + + PP TP D + +Y
Sbjct: 411 SHDVVKRRPV--PSLHACRSTLEDPPIDTTTPIDTTTRYRYY 450
>SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 492 HWPSFYNVVT 521
HWPSFYNVVT
Sbjct: 5 HWPSFYNVVT 14
>SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 492 HWPSFYNVVT 521
HWPSFYNVVT
Sbjct: 62 HWPSFYNVVT 71
>SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 492 HWPSFYNVVT 521
HWPSFYNVVT
Sbjct: 5 HWPSFYNVVT 14
>SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 492 HWPSFYNVVT 521
HWPSFYNVVT
Sbjct: 57 HWPSFYNVVT 66
>SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2051
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Frame = -1
Query: 512 VVKRRPVNCNTTHYRANWVPG--PPSRRR----TPRDC 417
+ +R PV+ H R+NWVP P S +R TP +C
Sbjct: 367 LARRTPVSVLCEHLRSNWVPNEYPASMKRLFEWTPDEC 404
>SB_7597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 252 WHDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHYLRTISWG 431
W D T+P + A D+ P + S N V++ P+ VE H+ + +
Sbjct: 103 WEDQSTAPVESGLAAPWDEQPSAYTGSHPVENTVAA---PLEDQSAAPVESHH-QAYRYR 158
Query: 432 PSPRGGARYPI 464
PRGGARY +
Sbjct: 159 -RPRGGARYQL 168
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 348 DYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI-PSFIVRLDS 172
D + G++ D+ L K +A L QR + V K VV F+++ +
Sbjct: 128 DTLRGVQKHDYARLNLDAPALKNPIALPFMRRHQLTPQRIMGVVKTVVQSNEQFVLQGNF 187
Query: 171 GKHIDFSLKSPFGGGRPGRVKRKN 100
H+ P+GGG+ G+ K+ +
Sbjct: 188 HLHV-VRTHMPYGGGKRGKSKKNS 210
>SB_30413| Best HMM Match : WSC (HMM E-Value=2.4)
Length = 259
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 201 CSQLACGHEYAFAGSKFWHDGWTSP 275
C++LA Y++ G +FW + W+ P
Sbjct: 72 CARLAEQKNYSYFGVQFWGECWSGP 96
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 390 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARIL 244
L++I D+K M+ +Y+LGL +E +R +++ + K H R L
Sbjct: 806 LLQILTQDDKNMEAEYLLGLILERQGKRLEAMKLYMDVIRKDTSHVRAL 854
>SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -1
Query: 470 RANWVPGPPSRR--RTPRDCSK 411
R++W P PPSRR RTP S+
Sbjct: 6 RSDWTPAPPSRRSDRTPAPPSR 27
>SB_45792| Best HMM Match : RVT_1 (HMM E-Value=3.5e-26)
Length = 600
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 199 DVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLN 327
D+ + A MP P +G+ D + Q +FE +++ T VL+
Sbjct: 381 DLEKVKAICEMPQPVDIAGVQDLIAQEAFEKIKMMITKAPVLH 423
>SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30)
Length = 1405
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = -3
Query: 417 FEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIR 238
F G A+ + G+L + LD ++G K ED+ +RRL+ ++ K A++ ++
Sbjct: 1139 FRGEAITFKATTAGILATLEHCLD-LMG-KREDYWQRRLEREIEKRKKAEASVKESVVSA 1196
Query: 237 QRH 229
++H
Sbjct: 1197 KKH 1199
>SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1020
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 256 CQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLSEISIRWRSSWTCQEEEPPQG 89
C NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 953 CMNFDGG--FGCRPGSESHAGQIYCCLGALSITHSLHHVNVDMLGWWLCERQLPSGG 1007
>SB_34026| Best HMM Match : PLDc (HMM E-Value=0.063)
Length = 499
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 318 SPQSSDQAHNRVSSVFHPVLQYEPDDVEGHYLRTISWGPS 437
SP+ +D H VSSV LQ DD H L+ ++ PS
Sbjct: 219 SPEVADFFHELVSSVSDISLQLHKDDTT-HMLKDFAFHPS 257
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 358 DETRLCAWSED*GLLGASSADAGVQSW 278
D + CAWS + + +SSAD V W
Sbjct: 89 DRVKSCAWSPNGEYVASSSADGRVTLW 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,889,975
Number of Sequences: 59808
Number of extensions: 349067
Number of successful extensions: 3803
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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