Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311D01f
         (468 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RJE3 Cluster: Mus musculus GCN2alpha; n=9; Plasmodium...    35   1.0  
UniRef50_Q8I565 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q5BG47 Cluster: Putative uncharacterized protein; n=1; ...    32   5.4  

>UniRef50_Q7RJE3 Cluster: Mus musculus GCN2alpha; n=9; Plasmodium
           (Vinckeia)|Rep: Mus musculus GCN2alpha - Plasmodium
           yoelii yoelii
          Length = 1496

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 404 NSNRLMSRVTLALTRRYTNLVLTSGQCIRLYELWVQTNLVYYVTNRLCSNIYKYIIK 234
           N++ +M  V +    ++ N+V       R Y+ WV+ N+ YY+   +  N YKY+IK
Sbjct: 496 NNSLIMEEVIMIAKLQHENIV-------RYYDAWVENNIDYYLFKEI-ENNYKYVIK 544


>UniRef50_Q8I565 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2026

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -2

Query: 425  AEETVPRNSNRLMSRVTLALTRRYTNLVLTSGQCIRLYELWVQTNLVYYVTNRLCSNI-Y 249
            +E+T     NR   + T    ++Y  LVLT   C+R   + +  N+V++ TN +C NI Y
Sbjct: 885  SEKTKKNEKNRNDRKNTKQCDKKY--LVLTKHMCLRKC-INIDHNIVFWGTNDICLNILY 941

Query: 248  KYIIK 234
            K + K
Sbjct: 942  KILRK 946


>UniRef50_Q5BG47 Cluster: Putative uncharacterized protein; n=1;
            Emericella nidulans|Rep: Putative uncharacterized protein
            - Emericella nidulans (Aspergillus nidulans)
          Length = 1125

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -2

Query: 431  NLAEETVPRNSNRLMSRVTLALTRRYTNLVLTSGQCIRLYELWVQTNLVYYVTNRLCSNI 252
            N +  T+ R+S +L+S    A  R    L     Q +   E      L +Y+   L  N+
Sbjct: 922  NFSPGTLDRSSIQLLSEPRYATPRATRTLQRLLRQALETQEKQALHELGWYINGNLIDNV 981

Query: 251  YKYIIKL 231
            Y++I++L
Sbjct: 982  YQWIVEL 988


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,527,251
Number of Sequences: 1657284
Number of extensions: 7925713
Number of successful extensions: 19747
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19744
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)