Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311D01f
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   5.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   5.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   9.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 329 QCIRLYELWVQTNLVYYVTN 270
           + I+  E  +Q N VY+VTN
Sbjct: 430 ELIKFIEEMLQRNDVYFVTN 449


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 329 QCIRLYELWVQTNLVYYVTN 270
           + I+  E  +Q N VY+VTN
Sbjct: 437 ELIKFIEEMLQRNDVYFVTN 456


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 368 LTRRYTNLVLTSGQC 324
           LTR Y + VL  G+C
Sbjct: 39  LTRNYLDCVLGKGKC 53


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 368 LTRRYTNLVLTSGQCIR 318
           +TR Y + VL  G+C +
Sbjct: 37  MTRNYLDCVLDKGKCTK 53


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 368 LTRRYTNLVLTSGQC 324
           LTR Y + VL  G+C
Sbjct: 39  LTRNYLDCVLGKGKC 53


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 368 LTRRYTNLVLTSGQC 324
           LTR Y + +L  G+C
Sbjct: 39  LTRNYIDCILGKGKC 53


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 410 ALSLRRGFVVDWLFPFXGF 466
           ++S   GF+  WL P  GF
Sbjct: 203 SISPSGGFLPKWLPPLQGF 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,491
Number of Sequences: 336
Number of extensions: 2217
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)