Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 34 0.062
SB_26944| Best HMM Match : Conotoxin (HMM E-Value=0.31) 31 0.58
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 0.58
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 31 0.58
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_13632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19) 29 3.1
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 4.1
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 28 4.1
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 28 5.4
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 27 7.1
SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014) 27 9.4
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 27 9.4
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 34.3 bits (75), Expect = 0.062
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 169
+PS SRS+ R+ R Q + SRS SR++ + RS+ +S S ++S SRS L
Sbjct: 38 SPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSL 93
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 8 STSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 163
S SRS+ R+ R + + SRS+SR++ + RS+ S S G +QST S+
Sbjct: 54 SQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSLSGGSSQSTRNSS 105
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 8 STSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSP 187
S SR + + Q P + SRS SR++ + RS+ S S ++S SRS RS
Sbjct: 24 SRSRGSNGSRGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSR 83
Query: 188 YRTQLRYR 211
R++ R R
Sbjct: 84 SRSRSRSR 91
>SB_26944| Best HMM Match : Conotoxin (HMM E-Value=0.31)
Length = 217
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAH--PVPSRKGRAVP 113
PR + VPREG P+PR + H PVP P
Sbjct: 162 PREDPHVALVPREGPHVAPVPREDPHVAPVPREDPHVAP 200
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRK 98
PR + VPRE P+PR + H P R+
Sbjct: 172 PREGPHVAPVPREDPHVAPVPREDPHVAPVRQ 203
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAH--PVPSRKGRA--VPS*HPRRQAIP--SPH 152
PR + VPRE P+PR + H PVP VP P +P PH
Sbjct: 122 PREDPHVALVPREDPPVTPVPREDPHVAPVPREDPHVALVPREDPHVALVPREGPH 177
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 76 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVH 174
H P+PV V P +PV P PV + VP+H
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVRVP--VPIH 242
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 106 PFPVNIPVDRPYPVHIEKHVPVHI 177
PFPV +PV P+ V + VPV +
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRV 237
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 8 STSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
S+SRS+ ++ R + +P+RS S + + RS S S HT+S SRS
Sbjct: 406 SSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRS 456
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 62 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
T SRS SR + + P RS+ S + ++S +RS RS R+++R R
Sbjct: 412 TKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSR 461
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 15 REASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH 176
+ ++ PR TSARP P+ + P P HP I R+ C+H
Sbjct: 342 KPTTAKPRPQTSARPRPQTTSRPQPQGAQCGAERCHPAGVCIVYQGRQECRCNH 395
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRT--Q*KRPCRSQLTSPSTGHTQSTSRSTCLFT 175
TP + TP + Q TP +S+ +T + C + ++ S+ HT+ ++RS+C T
Sbjct: 100 TPCKEQLSHNTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCHTKHSTRSSCHTT 159
Query: 176 LRSPYRTQLRY 208
P + QL +
Sbjct: 160 --QPCKKQLSH 168
>SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 170 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 81
TG WTG+G TG TG+GT TG+G
Sbjct: 171 TGHGTGRWTGHG--TGRWTGHGTGRWTGHG 198
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 170 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 81
TG WTG+G TG TG+GT G G
Sbjct: 179 TGHGTGRWTGHG--TGRWTGHGTGMGQGVG 206
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 170 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYGM 78
TG WTG+G G G G G GM
Sbjct: 187 TGHGTGRWTGHGTGMGQGVGQGMGQGVGQGM 217
>SB_13632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCP-PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTL 178
TP T R RT + PLTP R RT + LT GHT + + T T
Sbjct: 152 TPLTPRGPGRTLNHEKLTTPLTP-RGPGRTLNHEKLTTPLTPRGPGHTLNHEKLTTPLTP 210
Query: 179 RSPYRT 196
R P RT
Sbjct: 211 RGPGRT 216
>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
Length = 544
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVP 113
RP+ ++S P G P P R P P R+G P
Sbjct: 180 RPKNQSSRGAPYPGRRGAPYPGRRGAPYPGRRGAPYP 216
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRK 98
P+PRR G+ R RRE PVP R+
Sbjct: 214 PKPRRNREGRQGGGSRDRDSQRRERSPVPERR 245
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHRE 158
P PRR + S R TS P R++ P P R R HPRR + P R+
Sbjct: 567 PSPRRPSPSPRRRSTS----PSRKSPP-PRRVHRHQDVVHPRRDVV-HPRRD 612
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 9 PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS 116
P++ S P++GT P+R+ P PSR R +P+
Sbjct: 59 PKKTISKTPKKGT-----PKRKQDPSPSRGDRFIPN 89
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
P R+ S P E + P P P P R VP P + P+P
Sbjct: 1428 PAKRQMPESNPTERRVSPPFPAEHRIPPPDPAERRVPPPFPAERRTPAP 1476
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +1
Query: 82 PYPVEKAVP----FPVNIPVDRPYPVHIEKHVPVHIEK 183
P P+E+ VP P ++P++RP P P+ +E+
Sbjct: 493 PLPLERPVPAVTHLPTDLPLERPVPAVTRLPTPLLLER 530
>SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLT--PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFT 175
TP T++ Q + +Y CP LT R T C + + S T + T L
Sbjct: 40 TPKTTKEQKKKEGQYNCPSLTKFTKRGTVYNSVTDTCMTSVMSEGTINGDITLSGNTLAA 99
Query: 176 LRSP 187
L +P
Sbjct: 100 LSNP 103
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAV 110
P R+ SS+PR+G S R + HP P +G +
Sbjct: 1463 PEKSRKGSSLPRDGDSGR---TSDKHPPPHLRGARI 1495
>SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVP 113
PR R+A PRE S PLP + + + R+ P
Sbjct: 359 PRSPRDAPKEPREYASPPPLPSKSPRSPRTSESRSPP 395
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 44 YQCPPLTPSRSTSRTQ*KRPCRS-QLTSPSTGHTQSTSRSTCLFTLRSPYRT 196
Y PP T S +S+ P R+ L PS+ H+ S S+ T PY T
Sbjct: 1001 YPSPPHTTSSQSSQATHTPPPRAVDLPHPSSPHSSSALYSSPSRTSNLPYTT 1052
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 76 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHV----PVHIEK 183
H+ VE P + VD P P+H+++HV P+H+++
Sbjct: 1002 HLKEHVELPPPLHLKEHVDLPPPLHLKEHVELPPPLHLKE 1041
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 76 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHV----PVHIEK 183
H+ VE P + VD P P+H+++HV P+H+++
Sbjct: 1026 HLKEHVELPPPLHLKEHVDLPPPLHLKEHVELPPPLHLKE 1065
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 8 STSRSQFRT---P*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTG 136
S+SRSQ T + QC P +T + K C S T P+TG
Sbjct: 1086 SSSRSQPNTGTDEPKAQCNSSRPQPNTGTDEPKAQCNSSRTQPNTG 1131
>SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014)
Length = 475
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 73 SRRGKGRALVPSRGTELASRRGRG 2
SRRG+GR RG S RGRG
Sbjct: 349 SRRGRGRGRGRGRGRGRGSSRGRG 372
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = +3
Query: 12 RREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHRE 158
R+ + +P A P P R+ P P + P P + P P E
Sbjct: 239 RKPPAKLPPRQPVAEPEPERQPEPEPEPEQEPEPEPEPEPEPEPEPEPE 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,615,424
Number of Sequences: 59808
Number of extensions: 224680
Number of successful extensions: 994
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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