Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311C11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    34   0.003
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       28   0.22 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   0.67 
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   3.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 34.3 bits (75), Expect = 0.003
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
           PYP++  V  P+ IP+ +  P  IEK VP  +EK
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 33.5 bits (73), Expect = 0.004
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
           IP  +EK VP+ V    ++PYP+ +EK  PV + K
Sbjct: 216 IPKVIEKPVPYTV----EKPYPIEVEKPFPVEVLK 246



 Score = 32.7 bits (71), Expect = 0.008
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 177
           +P+PV  AVP  V + + +PYP+ +    P+ I
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 32.3 bits (70), Expect = 0.010
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
 Frame = +1

Query: 82  PYPVEKAVPFPV------NIPVDRPYPVHIE--KHV 165
           PYP+E   PFPV       +PV +PYPV +   KH+
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKHI 266



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = +1

Query: 97  KAVPFPV----NIPVDRPYPVHIEKHVPVHI 177
           K VP PV     +PV  P P+ +  +V V+I
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYI 194



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 168
           +P PV + V  PV  PV    P +++ ++P
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIP 195


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 331 HIKDEACVTNRIVVGFQILTYSTSLDRTH 417
           HI+ + C    IV GF +L YST   +TH
Sbjct: 15  HIRTDLCT--HIVYGFAVLDYSTLTIKTH 41


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 88  PVEKAVPFPVNIPVDRPYPVHI 153
           PV   VP+P+ IP+  P PV I
Sbjct: 625 PVTILVPYPIIIPLPLPIPVPI 646



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPV 129
           +PYP+   +P P+ +P+
Sbjct: 630 VPYPIIIPLPLPIPVPI 646


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 100 AVPFPVNIPVDRPY 141
           ++PFP N  V+RP+
Sbjct: 206 SIPFPTNATVERPF 219


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 53  PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTS 154
           PPL   +     +  RP +S   SPS G  QS S
Sbjct: 427 PPLHALKDFINKEPPRPGQSPTQSPSPGSQQSLS 460


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,481
Number of Sequences: 2352
Number of extensions: 7297
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)