Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 39 0.012
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 39 0.012
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 39 0.012
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 39 0.012
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 39 0.012
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 39 0.012
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 39 0.012
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 0.46
AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens ... 33 0.46
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 0.46
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 0.46
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 0.46
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 0.46
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 0.46
AL121674-3|CAI21745.1| 373|Homo sapiens chromodomain helicase D... 32 1.4
AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase D... 32 1.4
AL031669-4|CAI22256.1| 373|Homo sapiens chromodomain helicase D... 32 1.4
AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase D... 32 1.4
AL031667-6|CAI42981.1| 373|Homo sapiens chromodomain helicase D... 32 1.4
AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase D... 32 1.4
AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 32 1.4
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 31 1.9
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 1.9
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 31 1.9
DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein. 31 1.9
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 1.9
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 1.9
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 1.9
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 1.9
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 1.9
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 1.9
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 1.9
BC036105-1|AAH36105.1| 722|Homo sapiens zinc finger protein 219... 31 2.4
AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase D... 31 2.4
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 31 2.4
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 31 2.4
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 31 2.4
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 31 2.4
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 31 2.4
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 2.4
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 2.4
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 2.4
AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein. 31 2.4
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 2.4
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 31 2.4
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 31 2.4
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 31 2.4
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 31 2.4
AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein. 31 2.4
AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219... 31 2.4
AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein. 31 2.4
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 31 2.4
BC014002-1|AAH14002.1| 481|Homo sapiens zinc finger protein 358... 31 3.2
BC003585-1|AAH03585.1| 368|Homo sapiens Unknown (protein for IM... 31 3.2
AK001252-1|BAA91582.1| 481|Homo sapiens protein ( Homo sapiens ... 31 3.2
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 4.3
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 4.3
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 4.3
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 4.3
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 4.3
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 4.3
AK092654-1|BAC03938.1| 354|Homo sapiens UBUNIT (EC 2.4.1.-). p... 30 4.3
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 4.3
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 4.3
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 4.3
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 4.3
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 4.3
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 5.7
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 5.7
BC036689-1|AAH36689.1| 323|Homo sapiens MAFB protein protein. 30 5.7
BC028098-1|AAH28098.1| 323|Homo sapiens v-maf musculoaponeuroti... 30 5.7
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 5.7
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 5.7
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 5.7
AL035665-1|CAB75863.1| 323|Homo sapiens v-maf musculoaponeuroti... 30 5.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 5.7
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 5.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 5.7
AK131083-1|BAC85133.1| 500|Homo sapiens FLJ00283 protein protein. 29 7.5
AK024461-1|BAB15751.1| 443|Homo sapiens FLJ00053 protein protein. 29 7.5
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 29 9.9
BC016904-1|AAH16904.1| 544|Homo sapiens ACD protein protein. 29 9.9
AY502940-1|AAS80318.1| 544|Homo sapiens POT1 and TIN2 interacti... 29 9.9
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 29 9.9
AK023726-1|BAB14658.1| 541|Homo sapiens B1) mRNA. protein. 29 9.9
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 645
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 PRREASSVPREG---TSARPLPRREAHPVPSRKGRAV-PS*HPRRQAIPSPHREARACSH 176
P R AS PR+ TS R RR P P+R+ R+ P+ PRR+ P+P R S
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584
Query: 177 *EARTVPS 200
R PS
Sbjct: 585 PPRRRSPS 592
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 PRPRREASSVP-----REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
PR RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 595
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 657
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 PRPR-REASSVPREGTSARPLP---RREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
PR R +E S R S P P RR P P + R P+ PRR+ PSP R+
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-PSPPPRRRSP 591
Query: 171 S 173
S
Sbjct: 592 S 592
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 645
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 PRREASSVPREG---TSARPLPRREAHPVPSRKGRAV-PS*HPRRQAIPSPHREARACSH 176
P R AS PR+ TS R RR P P+R+ R+ P+ PRR+ P+P R S
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584
Query: 177 *EARTVPS 200
R PS
Sbjct: 585 PPRRRSPS 592
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 PRPRREASSVP-----REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
PR RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 595
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 657
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 PRPR-REASSVPREGTSARPLP---RREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
PR R +E S R S P P RR P P + R P+ PRR+ PSP R+
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-PSPPPRRRSP 591
Query: 171 S 173
S
Sbjct: 592 S 592
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 600 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 654
Score = 32.7 bits (71), Expect = 0.80
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 6 RPRREASSVP---REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
R RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 554 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 604
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 608 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 666
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 645
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 PRREASSVPREG---TSARPLPRREAHPVPSRKGRAV-PS*HPRRQAIPSPHREARACSH 176
P R AS PR+ TS R RR P P+R+ R+ P+ PRR+ P+P R S
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584
Query: 177 *EARTVPS 200
R PS
Sbjct: 585 PPRRRSPS 592
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 PRPRREASSVP-----REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
PR RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 595
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 657
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 PRPR-REASSVPREGTSARPLP---RREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
PR R +E S R S P P RR P P + R P+ PRR+ PSP R+
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-PSPPPRRRSP 591
Query: 171 S 173
S
Sbjct: 592 S 592
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 600 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 654
Score = 32.7 bits (71), Expect = 0.80
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 6 RPRREASSVP---REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
R RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 554 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 604
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 608 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 666
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 589 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 643
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 PRREASSVPREG---TSARPLPRREAHPVPSRKGRAV-PS*HPRRQAIPSPHREARACSH 176
P R AS PR+ TS R RR P P+R+ R+ P+ PRR+ P+P R S
Sbjct: 523 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 582
Query: 177 *EARTVPS 200
R PS
Sbjct: 583 PPRRRSPS 590
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 PRPRREASSVP-----REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
PR RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 540 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 593
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 597 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 655
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 PRPR-REASSVPREGTSARPLP---RREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
PR R +E S R S P P RR P P + R P+ PRR+ PSP R+
Sbjct: 531 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-PSPPPRRRSP 589
Query: 171 S 173
S
Sbjct: 590 S 590
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
P PRR + + R + + P RR A P P K RA PS P+R+ SP + R+
Sbjct: 589 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 643
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 PRREASSVPREG---TSARPLPRREAHPVPSRKGRAV-PS*HPRRQAIPSPHREARACSH 176
P R AS PR+ TS R RR P P+R+ R+ P+ PRR+ P+P R S
Sbjct: 523 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 582
Query: 177 *EARTVPS 200
R PS
Sbjct: 583 PPRRRSPS 590
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 PRPRREASSVP-----REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHR 155
PR RR S P R S P PRR P P + R PS PRR++ PSP R
Sbjct: 540 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR-RRTPSPPPRRRS-PSPRR 593
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPV--PSRKGRAVPS*HPRRQAIPSPHREAR 164
R +RE S PR S P PRR + PV ++ + H + PSP E +
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKK 217
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 PRPRREASSVP--REGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACS 173
P RR + S P R S P P+R A P P K R S P++++ P R + + S
Sbjct: 597 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS 655
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 PRPR-REASSVPREGTSARPLP---RREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
PR R +E S R S P P RR P P + R P+ PRR+ PSP R+
Sbjct: 531 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-PSPPPRRRSP 589
Query: 171 S 173
S
Sbjct: 590 S 590
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 647 SRSRTPAR 654
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 619 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 671
>AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ42981 fis, clone BRTHA2007422. ).
Length = 172
Score = 33.5 bits (73), Expect = 0.46
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 3 PRPRREASSVP---REGTSARPLPRREAHPVPSRKGRAVPS*HP 125
PR R E P R G + P PR+ HP+P + +P+ HP
Sbjct: 12 PRARTELPEAPGATRVGPPSTPAPRKVRHPLPPSQAGILPALHP 55
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 647 SRSRTPAR 654
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Frame = +2
Query: 2 TPSTSR-SQFRTP*------RYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTS 154
TP+T R S+ RTP R + PP+T RS SRT +R RS+ TSP T +S S
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRS 1996
Query: 155 RSTCLFTLRSPYRT 196
R++ + RS RT
Sbjct: 1997 RTSPVTRRRSRSRT 2010
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 619 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 671
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 647 SRSRTPAR 654
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Frame = +2
Query: 2 TPSTSR-SQFRTP*------RYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTS 154
TP+T R S+ RTP R + PP+T RS SRT +R RS+ TSP T +S S
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRS 1996
Query: 155 RSTCLFTLRSPYRT 196
R++ + RS RT
Sbjct: 1997 RTSPVTRRRSRSRT 2010
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 619 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 671
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 553 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 611
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 612 SRSRTPAR 619
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 584 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 636
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 378 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 436
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 437 SRSRTPAR 444
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 409 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 461
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.5 bits (73), Expect = 0.46
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLR 181
TP+ RS+ RTP R + TP+R R++ + P R + + S +S SRS + R
Sbjct: 636 TPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 694
Query: 182 SPYRTQLR 205
S RT R
Sbjct: 695 SRSRTPAR 702
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Frame = +2
Query: 2 TPSTSR-SQFRTP*------RYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTS 154
TP+T R S+ RTP R + PP+T RS SRT +R RS+ TSP T +S S
Sbjct: 1987 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRS 2044
Query: 155 RSTCLFTLRSPYRT 196
R++ + RS RT
Sbjct: 2045 RTSPVTRRRSRSRT 2058
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 2 TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 160
TP+ RS+ R+P R + +P+R + R++ + P R + T + SRS
Sbjct: 667 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 719
>AL121674-3|CAI21745.1| 373|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 151 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 210
Query: 180 EART 191
ART
Sbjct: 211 AART 214
>AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 116 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 175
Query: 180 EART 191
ART
Sbjct: 176 AART 179
>AL031669-4|CAI22256.1| 373|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 151 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 210
Query: 180 EART 191
ART
Sbjct: 211 AART 214
>AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 116 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 175
Query: 180 EART 191
ART
Sbjct: 176 AART 179
>AL031667-6|CAI42981.1| 373|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 151 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 210
Query: 180 EART 191
ART
Sbjct: 211 AART 214
>AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A+ + + H P +K A + PR + +E R+C+
Sbjct: 116 PKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 175
Query: 180 EART 191
ART
Sbjct: 176 AART 179
>AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein.
Length = 1269
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/55 (41%), Positives = 24/55 (43%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
RPRR A P R LP A P G AVP PRR+A P R R C
Sbjct: 1151 RPRRGAG--PHLQPPGRGLPAAPALLFP---GAAVPGRRPRRRAAGHPRRPGRPC 1200
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 910 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 969
Query: 13 RGR 5
R R
Sbjct: 970 RSR 972
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 773 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 832
Query: 13 RGR 5
R R
Sbjct: 833 RSR 835
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 225 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 284
Query: 13 RGR 5
R R
Sbjct: 285 RSR 287
>DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein.
Length = 868
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 33 PREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPH 152
PR SA PLP+ P PSR P+ P + PH
Sbjct: 158 PRASASAPPLPQAPQPPAPSRSAPGGPAASPSALLLRRPH 197
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1877 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1936
Query: 13 RGR 5
R R
Sbjct: 1937 RSR 1939
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1917 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1976
Query: 13 RGR 5
R R
Sbjct: 1977 RSR 1979
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1917 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1976
Query: 13 RGR 5
R R
Sbjct: 1977 RSR 1979
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1917 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1976
Query: 13 RGR 5
R R
Sbjct: 1977 RSR 1979
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1917 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1976
Query: 13 RGR 5
R R
Sbjct: 1977 RSR 1979
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1598 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1657
Query: 13 RGR 5
R R
Sbjct: 1658 RSR 1660
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -2
Query: 193 TVRASQCEQARASRCGLGMACRRGC*LGTARPFLLGTGCASRRGKGRALVPSRGTELASR 14
TVRA +R SR RR +G R F + SR R+ PSR + SR
Sbjct: 1923 TVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR 1982
Query: 13 RGR 5
R R
Sbjct: 1983 RSR 1985
>BC036105-1|AAH36105.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 33 PREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREA 161
P TSA P P+ + P P + R+VP P P P REA
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEPRSVPQPEPE----PEPEREA 256
>AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 2713
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 PRPRREAS-SVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH* 179
P+P+R+ P+E A + + H P +K A + PR + +E R+C+
Sbjct: 114 PKPKRKREPKEPKEPRKAEEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDS 173
Query: 180 EART 191
ART
Sbjct: 174 AART 177
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 821
Query: 171 SH 176
H
Sbjct: 822 PH 823
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 496 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 553
Query: 171 SH 176
H
Sbjct: 554 PH 555
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 821
Query: 171 SH 176
H
Sbjct: 822 PH 823
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 496 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 553
Query: 171 SH 176
H
Sbjct: 554 PH 555
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 821
Query: 171 SH 176
H
Sbjct: 822 PH 823
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 158 FSMWTGYGLSTGMLTGNGTAFSTGYG 81
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 158 FSMWTGYGLSTGMLTGNGTAFSTGYG 81
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 158 FSMWTGYGLSTGMLTGNGTAFSTGYG 81
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein.
Length = 1685
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 PRP-RREASSVPREGTSARPLPRREAHPVPSRKGRAVP 113
P P R S++PR T RP R+EA P PS+ A P
Sbjct: 905 PTPTHRRTSAIPRAFTRERPQGRKEA-PAPSKAAPAAP 941
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 158 FSMWTGYGLSTGMLTGNGTAFSTGYG 81
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 193 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 250
Query: 171 SH 176
H
Sbjct: 251 PH 252
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 210 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 267
Query: 171 SH 176
H
Sbjct: 268 PH 269
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 210 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 267
Query: 171 SH 176
H
Sbjct: 268 PH 269
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 821
Query: 171 SH 176
H
Sbjct: 822 PH 823
>AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein.
Length = 2303
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 PRP-RREASSVPREGTSARPLPRREAHPVPSRKGRAVP 113
P P R S++PR T RP R+EA P PS+ A P
Sbjct: 1523 PTPTHRRTSAIPRAFTRERPQGRKEA-PAPSKAAPAAP 1559
>AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 33 PREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREA 161
P TSA P P+ + P P + R+VP P P P REA
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEPRSVPQPEPE----PEPEREA 256
>AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein.
Length = 2303
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 PRP-RREASSVPREGTSARPLPRREAHPVPSRKGRAVP 113
P P R S++PR T RP R+EA P PS+ A P
Sbjct: 1523 PTPTHRRTSAIPRAFTRERPQGRKEA-PAPSKAAPAAP 1559
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 3 PRPRREASSVPREGT----SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARAC 170
P P A++VP +G+ A P+ PVP + P+ HP+R PSPH
Sbjct: 750 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP--PSPHPPPHPS 807
Query: 171 SH 176
H
Sbjct: 808 PH 809
>BC014002-1|AAH14002.1| 481|Homo sapiens zinc finger protein 358
protein.
Length = 481
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARP--LPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
P P SS P+ G A P +P + PVPS VPS P + P P
Sbjct: 399 PSPTPVESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDP 449
>BC003585-1|AAH03585.1| 368|Homo sapiens Unknown (protein for
IMAGE:3355405) protein.
Length = 368
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARP--LPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
P P SS P+ G A P +P + PVPS VPS P + P P
Sbjct: 286 PSPTPVESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDP 336
>AK001252-1|BAA91582.1| 481|Homo sapiens protein ( Homo sapiens
cDNA FLJ10390 fis, clone NT2RM4000104, moderately
similar to ZINC FINGER PROTEIN 135. ).
Length = 481
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 3 PRPRREASSVPREGTSARP--LPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
P P SS P+ G A P +P + PVPS VPS P + P P
Sbjct: 399 PSPTPVESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDP 449
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AK092654-1|BAC03938.1| 354|Homo sapiens UBUNIT (EC 2.4.1.-).
protein.
Length = 354
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 21 ASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
+S + G SA P PR P P + + + P R A P P ARA
Sbjct: 236 SSRLGAAGPSASPAPRSLPFPAPGLRSQRFSTSAPPRHARPPPVARARA 284
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 88 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>BC036689-1|AAH36689.1| 323|Homo sapiens MAFB protein protein.
Length = 323
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 50 CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYR 193
C L P+ S S T PC S +SPS T+ + L+ + S Y+
Sbjct: 46 CTRLQPAGSVSSTPLSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQ 93
>BC028098-1|AAH28098.1| 323|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog B (avian) protein.
Length = 323
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 50 CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYR 193
C L P+ S S T PC S +SPS T+ + L+ + S Y+
Sbjct: 46 CTRLQPAGSVSSTPLSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQ 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL035665-1|CAB75863.1| 323|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog B (avian) protein.
Length = 323
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 50 CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYR 193
C L P+ S S T PC S +SPS T+ + L+ + S Y+
Sbjct: 46 CTRLQPAGSVSSTPLSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQ 93
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Frame = +2
Query: 2 TPSTSR-SQFRTP*------RYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTS 154
TP+T R S+ RTP R + PP+T RS SRT +R RS+ TSP T +S S
Sbjct: 971 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRS 1028
Query: 155 RSTCLFTLRSPYRT 196
R++ + RS RT
Sbjct: 1029 RTSPVTRRRSRSRT 1042
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLR 205
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 117 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 164
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Frame = +2
Query: 2 TPSTSR-SQFRTP*------RYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTS 154
TP+T R S+ RTP R + PP+T RS SRT +R RS+ TSP T +S S
Sbjct: 462 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRS 519
Query: 155 RSTCLFTLRSPYRT 196
R++ + RS RT
Sbjct: 520 RTSPVTRRRSRSRT 533
>AK131083-1|BAC85133.1| 500|Homo sapiens FLJ00283 protein protein.
Length = 500
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 PRPRREASSVPREGTSAR-PLPRREAHPVPSRKGRAVP 113
PRPRRE S+P+ G P R P P RA+P
Sbjct: 153 PRPRREGRSLPQSGRCTHLGTPGRLGAPHPCPPERALP 190
>AK024461-1|BAB15751.1| 443|Homo sapiens FLJ00053 protein protein.
Length = 443
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 PRPRREASSVPREGTSAR-PLPRREAHPVPSRKGRAVP 113
PRPRRE S+P+ G P R P P RA+P
Sbjct: 153 PRPRREGRSLPQSGRCTHLGTPGRLGAPHPCPPERALP 190
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 5 PSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 163
P +S T Y C PL S +T T P LTSP+T T ++S++T
Sbjct: 28 PGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKVLTSPATTPTATSSKAT 79
>BC016904-1|AAH16904.1| 544|Homo sapiens ACD protein protein.
Length = 544
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HP 125
RPR +A V G RP P +E P+P + G P+ +P
Sbjct: 37 RPRAQARGVRGRGLLLRPRPAKEL-PLPRKGGAWAPAGNP 75
>AY502940-1|AAS80318.1| 544|Homo sapiens POT1 and TIN2 interacting
protein protein.
Length = 544
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HP 125
RPR +A V G RP P +E P+P + G P+ +P
Sbjct: 37 RPRAQARGVRGRGLLLRPRPAKEL-PLPRKGGAWAPAGNP 75
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 68 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYRTQLRYR 211
SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 192 SRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AK023726-1|BAB14658.1| 541|Homo sapiens B1) mRNA. protein.
Length = 541
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 6 RPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HP 125
RPR +A V G RP P +E P+P + G P+ +P
Sbjct: 37 RPRAQARGVRGRGLLLRPRPAKEL-PLPRKGGAWAPAGNP 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,412,120
Number of Sequences: 237096
Number of extensions: 976557
Number of successful extensions: 4080
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 3231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3947
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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