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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311C11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    31   0.38 
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical pr...    31   0.66 
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    31   0.66 
Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    29   2.7  
U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U67967-1|AAC47829.1|  413|Caenorhabditis elegans PTL-1B protein ...    27   6.2  
U67966-1|AAB97090.1|  453|Caenorhabditis elegans PTL-1A protein ...    27   6.2  
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    27   6.2  
U38983-1|AAA80687.1|  436|Caenorhabditis elegans TAU-1b protein.       27   6.2  
U38982-1|AAA80686.1|  431|Caenorhabditis elegans TAU-1a protein.       27   6.2  
U00051-4|AAK70645.1|  453|Caenorhabditis elegans Protein with ta...    27   6.2  
U00051-3|AAK70647.1|  413|Caenorhabditis elegans Protein with ta...    27   6.2  
U00051-2|AAK70646.1|  458|Caenorhabditis elegans Protein with ta...    27   6.2  

>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 76  HIPYPVEKAVPFPVNIPVDRPYPVHI 153
           H+P PV   VP P+ +PV  P P  +
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPV 180



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 171
           P PV + VP PV  PV  P P+ +   VPV
Sbjct: 149 PQPVIQHVPVPV--PVQVPVPIRVPVPVPV 176



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVH 150
           +P PV+  VP  V +PV  P PV+
Sbjct: 158 VPVPVQVPVPIRVPVPVPVPTPVY 181


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 8   STSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSP 187
           S SRS+ R+  R +    + SRS SR++   P RS+  S S   ++S SRS      RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270

Query: 188 YRT 196
            R+
Sbjct: 271 SRS 273


>U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical
           protein F35A5.5 protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 171
           +P PV + VP P+ +P+  P P+ +   VPV
Sbjct: 15  VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45



 Score = 30.3 bits (65), Expect = 0.87
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 177
           P PV   VP PV +P+  P P+ +   VPV +
Sbjct: 12  PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 177
           IP PV    P P  +PV  P P+ +   +PV +
Sbjct: 9   IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 79  IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIE 180
           +P P     P PV +P+  P P+ +   VPV ++
Sbjct: 13  VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46



 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 171
           P P+    P PV  PV +P PV +   +P+
Sbjct: 4   PIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P P+ E    P+     +P P  +  P P  K +  P+ +P+ +  P P
Sbjct: 197 PNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKP 245



 Score = 30.3 bits (65), Expect = 0.87
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPH 152
           P+P+ + +  P+     +P P+ +  P P  K ++ P   P+ +  P P+
Sbjct: 227 PKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPN 276



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P+ E    P+     +P P+ +  P P+ K    P   P  +  P P
Sbjct: 169 PKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKP 217



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P  +    P+     +P P+ E  P P  K +  P  +P  +  P P
Sbjct: 195 PKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKP 243



 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREAR 164
           P+P+ +    P+     +P P  +  P P  K +  P   P+ +  P+P  E +
Sbjct: 189 PKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPK 242



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P+ +    P+     +P P+    P P  K +  P   P+ +  P P
Sbjct: 175 PKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKP 223



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P+ +    P+   + +P P+ +  P P  K +  P   P+ +  P P
Sbjct: 183 PKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKP 231



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPH 152
           P+P+ +    P+      P P+ +  P P  K    P   P+ +  P P+
Sbjct: 185 PKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPN 234



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPH 152
           P+P+ +    P      +P P+ E  P P  + +  P   P+ +  P+P+
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPN 236



 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P+ E    P+     +P P+ +  P P+   +  P   P+ +  P P
Sbjct: 205 PKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEP 253



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREAR 164
           P P+ E    P+     +P P+ +  P P  K +  P  +P+ +  P P  E +
Sbjct: 161 PNPKPEPKPKPKP--EPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPK 212



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/54 (22%), Positives = 23/54 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREAR 164
           P+P+ +    P+     +P P+ +  P P    +  P   P+ +  P P  E +
Sbjct: 167 PKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPK 220



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P P+ +    P+     +P P+ + +P P  K +  P   P+ +  P P
Sbjct: 173 PEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKP 221



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIP 143
           P+P+ +    P+      P P  E  P P  K  + P  +PR +  P
Sbjct: 263 PKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKP 309



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREAR 164
           P P+ +    P+      P P+ +  P P  K    P   P+ +  P P  E +
Sbjct: 201 PEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPK 254



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPS 146
           P P  E    P+   ++RP P     P P  K    P   P+ +  P+
Sbjct: 281 PNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKPELKPN 328



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P+ +    P+     +P P  +  P P  K    P   P  +  P P
Sbjct: 177 PKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKP 225



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 149
           P+P  +    P+     +P P+ E  P P  + +  P   P+ +  P P
Sbjct: 179 PKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKP 227



 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/55 (21%), Positives = 23/55 (41%)
 Frame = +3

Query: 3   PRPRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARA 167
           P+P  +    P      +P P+ +  P P+ K    P   P+ +  P P  + ++
Sbjct: 207 PKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKS 261


>Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical
           protein H08M01.1 protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 129 RQAIPSPHREARACSH*EARTVP 197
           RQ +P+P R AR  SH + RT P
Sbjct: 197 RQNVPAPRRSARIASHTQYRTSP 219


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 2   TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 163
           TPST +S   TP   +  P TP+   S         +  ++P+T  T +T +ST
Sbjct: 154 TPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 207



 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 2   TPSTSRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 163
           TP+T +S   TP   +  P TP+  T+         +  ++P+T  T  +S +T
Sbjct: 392 TPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTT 445


>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 183
           P+P     P P+ IP   P+P  + K +P H  K
Sbjct: 194 PFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 168
           P P+ K +PFP  +P  +P P  + K  P
Sbjct: 238 PMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 82  PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 168
           P P+ K +PFP   P+ +P P H  K  P
Sbjct: 204 PMPIPKPMPFPK--PMPKPMPKHKPKPFP 230


>U67967-1|AAC47829.1|  413|Caenorhabditis elegans PTL-1B protein
           protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 38  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 97

Query: 189 TVP 197
            VP
Sbjct: 98  PVP 100


>U67966-1|AAB97090.1|  453|Caenorhabditis elegans PTL-1A protein
           protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 38  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 97

Query: 189 TVP 197
            VP
Sbjct: 98  PVP 100


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = +2

Query: 14  SRSQFRTP*RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLFTLRSPYR 193
           SRS+ R+P R +  P+  SRS SR+  + P R+   + S   +Q+ S ST  + L SP R
Sbjct: 347 SRSRSRSPPRKR--PVRRSRSRSRS--RTPNRNWTRARSRTRSQAKSSSTLTWPL-SPSR 401

Query: 194 TQ 199
           ++
Sbjct: 402 SR 403


>U38983-1|AAA80687.1|  436|Caenorhabditis elegans TAU-1b protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 16  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 75

Query: 189 TVP 197
            VP
Sbjct: 76  PVP 78


>U38982-1|AAA80686.1|  431|Caenorhabditis elegans TAU-1a protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 16  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 75

Query: 189 TVP 197
            VP
Sbjct: 76  PVP 78


>U00051-4|AAK70645.1|  453|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform a protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 38  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 97

Query: 189 TVP 197
            VP
Sbjct: 98  PVP 100


>U00051-3|AAK70647.1|  413|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform c protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 38  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 97

Query: 189 TVP 197
            VP
Sbjct: 98  PVP 100


>U00051-2|AAK70646.1|  458|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform b protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/63 (26%), Positives = 19/63 (30%)
 Frame = +3

Query: 9   PRREASSVPREGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSPHREARACSH*EAR 188
           P  E    P       P P  E  P P  +   VP   P  +  P P  E       E  
Sbjct: 38  PEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPE 97

Query: 189 TVP 197
            VP
Sbjct: 98  PVP 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,964,861
Number of Sequences: 27780
Number of extensions: 152320
Number of successful extensions: 862
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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