Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C09f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00003BFFA3 Cluster: PREDICTED: similar to intersex C... 118 6e-26
UniRef50_Q16TJ7 Cluster: Mediator of RNA polymerase II transcrip... 116 3e-25
UniRef50_Q7KBL8 Cluster: Mediator of RNA polymerase II transcrip... 113 3e-24
UniRef50_Q9NX70 Cluster: Mediator of RNA polymerase II transcrip... 87 2e-16
UniRef50_UPI0000584AF3 Cluster: PREDICTED: similar to MGC85347 p... 75 1e-12
UniRef50_Q8JHI6 Cluster: Mediator of RNA polymerase II transcrip... 69 7e-11
UniRef50_Q0IGZ7 Cluster: IP01844p; n=1; Drosophila melanogaster|... 67 2e-10
UniRef50_A7SW44 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_UPI00006CFAC6 Cluster: hypothetical protein TTHERM_0047... 34 2.3
UniRef50_A3IB44 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q229H4 Cluster: Response regulator receiver domain cont... 33 5.2
UniRef50_Q9ULJ1 Cluster: Outer dense fiber protein 2-like protei... 32 9.2
UniRef50_Q5TBX4 Cluster: Novel protein; n=19; Eutheria|Rep: Nove... 32 9.2
>UniRef50_UPI00003BFFA3 Cluster: PREDICTED: similar to intersex
CG13201-PA; n=2; Apocrita|Rep: PREDICTED: similar to
intersex CG13201-PA - Apis mellifera
Length = 190
Score = 118 bits (285), Expect = 6e-26
Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKG-MDNPVPRFEKNLEEF 358
+K+DNISKVKSL+ SLR+S+ + LK+AA LHQN D + KG +D P RF KN+EEF
Sbjct: 51 EKLDNISKVKSLIVSLRDSLAIALKTAAHTLHQNSLVDVGSLKGGIDQPDHRFNKNIEEF 110
Query: 359 FSICDQMELHLRTATTCIQQAQSAAHYLPLSVIASRLDSGPTTQETTLSYPQYL 520
+SICDQ+ELHL+T+ C Q S+ YLP+ V+ R D+ TQE L+YPQ+L
Sbjct: 111 YSICDQIELHLKTSIECTSQNSSSLRYLPVPVMPQRTDT-VGTQE-ALTYPQFL 162
>UniRef50_Q16TJ7 Cluster: Mediator of RNA polymerase II
transcription subunit 29; n=2; Aedes aegypti|Rep:
Mediator of RNA polymerase II transcription subunit 29 -
Aedes aegypti (Yellowfever mosquito)
Length = 214
Score = 116 bits (279), Expect = 3e-25
Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKG-MDNPVPRFEKNLEEF 358
+K+DNISKVK L+G LR+S+ T+K+AAQ+L QN+ D+ T+ G M PRF+K+LEEF
Sbjct: 76 EKVDNISKVKGLVGPLRDSLSTTVKTAAQLLQQNNLNDAGTKGGDMSTTTPRFDKHLEEF 135
Query: 359 FSICDQMELHLRTATTCIQQAQSAAHYLPLSVIASRLDSGPTTQET-TLSYPQYL 520
+SICDQ+EL+L+TA C+QQ S+ YLP+ V ++ P ET LSY QYL
Sbjct: 136 YSICDQIELNLKTAKLCMQQGASSQQYLPIPVAPTQ----PNPAETNALSYSQYL 186
>UniRef50_Q7KBL8 Cluster: Mediator of RNA polymerase II
transcription subunit 29; n=7; Endopterygota|Rep:
Mediator of RNA polymerase II transcription subunit 29 -
Drosophila melanogaster (Fruit fly)
Length = 188
Score = 113 bits (271), Expect = 3e-24
Identities = 53/113 (46%), Positives = 80/113 (70%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFF 361
+K+DNIS+VKSL+G LRES+ +T++S+A L QN+ AD+ + + VPRF+K+LE+F+
Sbjct: 48 EKLDNISRVKSLLGPLRESMFLTIRSSAFALQQNNLADNLKRDTGAHHVPRFDKHLEDFY 107
Query: 362 SICDQMELHLRTATTCIQQAQSAAHYLPLSVIASRLDSGPTTQETTLSYPQYL 520
+ CDQ+E+HL+TA C+QQ S+ HYLP V R+++ +SYP YL
Sbjct: 108 ACCDQIEIHLKTAMQCLQQQNSSNHYLPGPVTPMRMETFMPDNAGPISYPTYL 160
>UniRef50_Q9NX70 Cluster: Mediator of RNA polymerase II
transcription subunit 29; n=21; Euteleostomi|Rep:
Mediator of RNA polymerase II transcription subunit 29 -
Homo sapiens (Human)
Length = 200
Score = 87.4 bits (207), Expect = 2e-16
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 DNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSIC 370
D + + K L+ L+ES+ +K AAQ L QN N D N QK D P+ RF+K LEEF+++C
Sbjct: 55 DPVQRYKMLIPQLKESLQTLMKVAAQNLIQNTNID-NGQKSSDGPIQRFDKCLEEFYALC 113
Query: 371 DQMELHLRTATTCIQQA-QSAAHYLPLSVIASRLDSGPTTQETTLSYPQYL 520
DQ+EL LR A C+ Q+ SA H L A++ D+ Q +L YPQYL
Sbjct: 114 DQLELCLRLAHECLSQSCDSAKHSPTLVPTATKPDA---VQPDSLPYPQYL 161
>UniRef50_UPI0000584AF3 Cluster: PREDICTED: similar to MGC85347
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC85347 protein -
Strongylocentrotus purpuratus
Length = 198
Score = 74.5 bits (175), Expect = 1e-12
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 DNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSIC 370
D I+KVK + L+E++ +K +AQ + D NT K D RF+K+LEEF+S+C
Sbjct: 62 DAIAKVKMTVVLLKEALRNLMKISAQAFAHSATID-NTTKTSDEIAARFDKSLEEFYSLC 120
Query: 371 DQMELHLRTATTCIQQAQSAAHYLPLSVIAS-RLDSGPTTQETTLSYPQYL 520
DQ+EL LR A C Q A Y P+ ++ S + D PT L+Y QY+
Sbjct: 121 DQLELSLRLAYDCTTQFMDGARYTPVPLVHSHKPDMMPT---EALTYGQYI 168
>UniRef50_Q8JHI6 Cluster: Mediator of RNA polymerase II
transcription subunit 29; n=1; Danio rerio|Rep: Mediator
of RNA polymerase II transcription subunit 29 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 179
Score = 68.9 bits (161), Expect = 7e-11
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +2
Query: 191 DNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSN---TQKGMDNPVPRFEKNLEEFF 361
D + + K L+ L++S+ + A+ N D+ T+KG D V RF+K+LEEF+
Sbjct: 36 DPVHRFKMLIPPLKDSLQNVMTIASLNFAHNTAIDNGLKTTEKGNDAAVQRFDKSLEEFY 95
Query: 362 SICDQMELHLRTATTCIQQA-QSAAHYLPLSVIASRLDSGPTTQETTLSYPQYL 520
++CDQ+EL LR A C+ Q+ S H L A++ D T Q +LSY QYL
Sbjct: 96 ALCDQLELCLRLAHECLSQSIDSTKHSPNLVPTATKPD---TVQTESLSYSQYL 146
>UniRef50_Q0IGZ7 Cluster: IP01844p; n=1; Drosophila
melanogaster|Rep: IP01844p - Drosophila melanogaster
(Fruit fly)
Length = 203
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/63 (49%), Positives = 49/63 (77%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFF 361
+K+DNIS+VKSL+G LRES+ +T++S+A L QN+ AD+ + + VPRF+K+LE+F+
Sbjct: 74 EKLDNISRVKSLLGPLRESMFLTIRSSAFALQQNNLADNLKRDTGAHHVPRFDKHLEDFY 133
Query: 362 SIC 370
+ C
Sbjct: 134 ACC 136
>UniRef50_A7SW44 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 158
Score = 44.0 bits (99), Expect = 0.002
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Frame = +2
Query: 191 DNISKVKSLMGS-LRESIPMTLKSAAQILHQNHNADSNTQ-KGMDNPVP--------RFE 340
+ I+++K L+ +R +I L + L QN +D+ K DNP R E
Sbjct: 17 EQITRLKGLLLQYIRPNILSLLNQSDLALQQNVYSDTGVPGKSADNPNKEPTTENPHRLE 76
Query: 341 KNLEEFFSICDQMELHLRTATTCIQQAQSAAHYLPLSVIASRLDSGPTTQETTLSYPQYL 520
K +E+ + CD ME L+T Q +A Y P V ++ G T+QET SYP+YL
Sbjct: 77 KTMEDVLNSCDLMEDLLQTMKETEIQTLCSAKYSPRPVTHNK---GDTSQETQ-SYPEYL 132
>UniRef50_UPI00006CFAC6 Cluster: hypothetical protein
TTHERM_00470700; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00470700 - Tetrahymena
thermophila SB210
Length = 682
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 236 SIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRF---EKNLEEFFSICDQMELHLRTATT 406
SIP TL+ AQ++ N S QK +D P+ E N ++F +IC L R
Sbjct: 537 SIPQTLRKIAQVVQSQRNT-SYFQKNIDEIFPKLEINENNKDDFCTICHDQLLVGRRLKD 595
Query: 407 C 409
C
Sbjct: 596 C 596
>UniRef50_A3IB44 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 422
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFF 361
D++++++K + M + +S+ MT++S + L N + + T M N + N+EE
Sbjct: 93 DEVEDLAKTLNRMTASLQSMIMTMRSTSNTLANNADETACTLNEMTNTIQEVAHNIEEVT 152
Query: 362 SICDQMELHLRTAT 403
S H AT
Sbjct: 153 STVTAGMHHAENAT 166
>UniRef50_Q229H4 Cluster: Response regulator receiver domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Response regulator receiver domain containing
protein - Tetrahymena thermophila SB210
Length = 1274
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 245 MTLKSAAQILHQNHNADSNTQKGMDNPVP 331
+ L+SA QIL NH+ SNT NP+P
Sbjct: 154 LKLESATQILENNHSKTSNTHTFQINPIP 182
>UniRef50_Q9ULJ1 Cluster: Outer dense fiber protein 2-like protein;
n=9; Mammalia|Rep: Outer dense fiber protein 2-like
protein - Homo sapiens (Human)
Length = 696
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +2
Query: 197 ISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSICDQ 376
I K+ + L+E+ + +LH+N+ K ++ + E +L+E +CD
Sbjct: 472 IEMYKTQVQKLQEAAEIVKSRCENLLHKNNQITKTKNKNVEKMRGQMESHLKELERVCDS 531
Query: 377 MELHLRTATTCIQQAQ 424
+ R C + Q
Sbjct: 532 LTAAERRLHECQESLQ 547
>UniRef50_Q5TBX4 Cluster: Novel protein; n=19; Eutheria|Rep: Novel
protein - Homo sapiens (Human)
Length = 620
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +2
Query: 197 ISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSICDQ 376
I K+ + L+E+ + +LH+N+ K ++ + E +L+E +CD
Sbjct: 383 IEMYKTQVQKLQEAAEIVKSRCENLLHKNNQITKTKNKNVEKMRGQMESHLKELERVCDS 442
Query: 377 MELHLRTATTCIQQAQ 424
+ R C + Q
Sbjct: 443 LTAAERRLHECQESLQ 458
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,616,262
Number of Sequences: 1657284
Number of extensions: 8425712
Number of successful extensions: 24305
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24300
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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