Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 29 2.7
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 29 2.7
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 29 2.7
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 29 2.7
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 29 2.7
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 29 2.7
AF016414-1|AAG24023.2| 577|Caenorhabditis elegans Hypothetical ... 28 3.5
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF125952-8|AAD14692.1| 349|Caenorhabditis elegans Seven tm rece... 28 4.7
AC006722-14|AAK68413.1| 349|Caenorhabditis elegans Seven tm rec... 28 4.7
Z50044-8|CAA90360.1| 591|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 27 6.2
Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 198 DMNASQFNQPTPANQMAASANVGYEIP 224
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 177 DMNASQFNQPTPANQMAASANVGYEIP 203
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 177 DMNASQFNQPTPANQMAASANVGYEIP 203
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 177 DMNASQFNQPTPANQMAASANVGYEIP 203
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 198 DMNASQFNQPTPANQMAASANVGYEIP 224
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 26 NMNHNQMNMHVPMNQVAGAPNVAMQMP 106
+MN +Q N P NQ+A + NV ++P
Sbjct: 177 DMNASQFNQPTPANQMAASANVGYEIP 203
>AF016414-1|AAG24023.2| 577|Caenorhabditis elegans Hypothetical
protein D1065.3 protein.
Length = 577
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 182 DKMDNISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKG 313
DK+DN+ + K G+L E I M++ ++ ++ + TQ+G
Sbjct: 467 DKIDNLKQFKKTFGTLHEYINMSMTGSSTNINLIQMLLTTTQEG 510
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 194 NISKVKSLMGSLRESIPMTLKSAAQILHQNHNADSNTQKGMDNPV 328
++SK KS+ GS SI + S Q+ Q+ N+D N+ G+D +
Sbjct: 622 SVSK-KSVAGSESNSIKGSRSSGLQLSLQDGNSDLNSVGGLDTAI 665
>AF125952-8|AAD14692.1| 349|Caenorhabditis elegans Seven tm
receptor protein 76 protein.
Length = 349
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -1
Query: 197 YCPFYLVVFVEALVQVAFVEEIAVALWVLVQAFAWLHLELQQLGSLVRAYSFDCDSYLKF 18
+C +L F + V FVE + +V FA L + + L R ++ + ++YL +
Sbjct: 16 FCASFLANFFIIYLTVFFVENVVGTYKKMVIIFASLGIIFSIIEVLARPFAHNFNNYLMY 75
Query: 17 LD*NY 3
N+
Sbjct: 76 FSFNF 80
>AC006722-14|AAK68413.1| 349|Caenorhabditis elegans Seven tm
receptor protein 265 protein.
Length = 349
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -1
Query: 197 YCPFYLVVFVEALVQVAFVEEIAVALWVLVQAFAWLHLELQQLGSLVRAYSFDCDSYLKF 18
+C +L F + V FVE + +V FA L + + L R ++ + ++YL +
Sbjct: 16 FCASFLANFFIIYLTVFFVENVVGTYKKMVIIFASLGIIFSIIEVLARPFAHNFNNYLMY 75
Query: 17 LD*NY 3
N+
Sbjct: 76 FSFNF 80
>Z50044-8|CAA90360.1| 591|Caenorhabditis elegans Hypothetical
protein F22B5.9 protein.
Length = 591
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 71 LGSLVRAYSFDCDSYLKFLD 12
+G+++R SFD DSY F+D
Sbjct: 123 VGAVLRDISFDADSYASFID 142
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 VVFVEALVQVAFVEEIAVALWVLVQAFAWLHLELQQLGSLVR-AYSFDCDSYL 24
++F+ V+ + V LW + + W H ++ LG +V A++F+ Y+
Sbjct: 189 IMFLSWAYDVSQFGLVIVYLWTYIVGYQWFHFDV--LGGIVNFAFTFEIGFYM 239
>Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical
protein F57B1.5 protein.
Length = 157
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 173 FVEALVQVAFVEEIAVALWVLVQAFAWLHLE 81
F+ A+ + + +++LW +VQ F W+ +E
Sbjct: 48 FLLAIYDILAIGIASISLWFIVQKFYWIKVE 78
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 KSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSICDQMELHLRTATTCIQQAQSAA 433
K AA ++ NHN +++ + M + + SI + RT CI Q +
Sbjct: 533 KKAAALI-TNHNRENSQSESMASSSESLSSDARSKISIKKRSNSPPRTVAPCILPKQPSQ 591
Query: 434 HYLPL-SVIASRLDSGPTTQET 496
L L +S +DS +TQ T
Sbjct: 592 RTLTLQQQSSSSIDSLNSTQTT 613
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 KSAAQILHQNHNADSNTQKGMDNPVPRFEKNLEEFFSICDQMELHLRTATTCIQQAQSAA 433
K AA ++ NHN +++ + M + + SI + RT CI Q +
Sbjct: 533 KKAAALI-TNHNRENSQSESMASSSESLSSDARSKISIKKRSNSPPRTVAPCILPKQPSQ 591
Query: 434 HYLPL-SVIASRLDSGPTTQET 496
L L +S +DS +TQ T
Sbjct: 592 RTLTLQQQSSSSIDSLNSTQTT 613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,038,669
Number of Sequences: 27780
Number of extensions: 210428
Number of successful extensions: 594
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -