Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311C03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.7  
AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    23   4.7  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 208 ANKMA-FEFLKVKIHANIMTNKFKLFINNNYQLIHVS*LRIAPSV 339
           AN++  + FLK+    N  TN  +LF++ +  LIHV+   I PS+
Sbjct: 329 ANQIVRYSFLKLAQKHNF-TNVLQLFLHTSNGLIHVN---IQPSI 369


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 360  LDLIVLIHISMYSALKVLKCFIFCFNNAFYDYINM-QPVVKLAFLIKLMKFNKNI 521
            LDL+ LI  ++++   V K   F F N F D  N+   ++ L   I ++    NI
Sbjct: 1207 LDLLNLIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEVNI 1261


>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +3

Query: 330 AIC*QIVKLSLDLIVLIHISMYSALKVLKCFIFC 431
           ++C    K++ +L+  +  S ++ +K LKC++ C
Sbjct: 34  SVCLGKTKVAEELVNGLRESKFADVKELKCYVNC 67


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 439 LLKQNIKHFNTFNAEYIEI*MSTIKSNDSFTI 344
           L  + ++HFN F    + + ++ I SN SF +
Sbjct: 210 LRNRRLRHFNAFYPICLNLLLALIASNLSFIL 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,118
Number of Sequences: 2352
Number of extensions: 5411
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)