Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 29 1.7
04_04_1129 - 31107892-31110246 29 1.7
02_04_0311 + 21936812-21937861 29 1.7
04_04_0057 + 22410167-22411330 29 2.3
03_03_0201 - 15400953-15401080,15401787-15401882,15402252-154024... 29 2.3
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 3.0
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 28 4.0
12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947... 28 4.0
11_06_0183 - 20999343-20999865,21000351-21000748 28 4.0
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 28 4.0
07_03_1346 + 25927043-25927333,25927867-25927929,25928005-259280... 28 4.0
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 5.2
03_02_0076 - 5451137-5452503,5453439-5453866,5453949-5454046,545... 28 5.2
01_06_0751 + 31690411-31690443,31692900-31694240 28 5.2
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 6.9
04_03_0716 + 18995712-18995904,18996511-18996614,18997280-189973... 27 6.9
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 27 6.9
02_05_0686 - 30900748-30902167,30903442-30904742 27 6.9
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810... 27 9.1
05_06_0259 + 26733699-26733854,26733940-26734071,26734171-267343... 27 9.1
03_01_0108 + 857303-857372,857690-857730,857751-857783,857901-85... 27 9.1
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 121 DPQPPAAVLAS--SPFVTSQPTEELLREFETVYGAVELTHL 237
DP PA V S SP + QP EL+RE T+ +E+ HL
Sbjct: 78 DPDHPAPVNLSLESPMLKVQPANELIREVATL--ELEIKHL 116
>04_04_1129 - 31107892-31110246
Length = 784
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 79 PSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEEL-LREFETV--YGAVELTHLTPPQ 249
PS+ +S +P + P P +LA+S S PT L L + V + L PP+
Sbjct: 103 PSLSAALSALPSQ--PDPALLLLAASSLPASDPTPLLALVAWARVQPWFVPSDDTLLPPR 160
Query: 250 SPPGPATQLL 279
PP P QLL
Sbjct: 161 RPPRPGHQLL 170
>02_04_0311 + 21936812-21937861
Length = 349
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 55 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEE 186
WLE V P N+ + P P PPA +SSP + EE
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAAAEE 194
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 55 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 159
WLE +V P N+ + P P P AA + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198
>03_03_0201 -
15400953-15401080,15401787-15401882,15402252-15402402,
15404352-15404548,15404660-15404819
Length = 243
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 466 VAEMPVERLGDGPVPRRRPSH 404
+A +P ER+GDG PRRRP H
Sbjct: 134 LATIPKERVGDG--PRRRPRH 152
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 115 RVDPQPPAAVLASSPFVTSQPT-EELLREFETVYGAVELTHLTPPQSPPGPATQ 273
+V P PP+A + S P + P + ET++ + + PQ+PP P Q
Sbjct: 302 QVPPVPPSAPVPSVPALPRDPYYAPPAQPTETMHQQYQAPPVPQPQAPPAPPQQ 355
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +1
Query: 100 SEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGPATQLL 279
+E P + P PP + AS S P + LLR+ V PP PP PA LL
Sbjct: 4 AEDPAKPPPPPPPQLEASG----SDPDDPLLRDRVVVIAPPPPP--PPPPPPPAPAPALL 57
>12_01_0951 -
9471391-9471597,9471857-9471966,9473173-9473278,
9474719-9475060,9475598-9475647,9476745-9477717
Length = 595
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 132 PGSGSSFKSFCDLAAH*RTAAGIRNGLWCCR 224
P GS S C + TA G+ GLWCCR
Sbjct: 397 PSCGSYTASACPIYVESGTA-GVVIGLWCCR 426
>11_06_0183 - 20999343-20999865,21000351-21000748
Length = 306
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 420 DGVQVTLVTFRQLVNRNRCHNLPRFLRRCQGS-WRC*CCALCLLSV 286
DG++V + ++V+ RCHNLP + G +R C AL L +V
Sbjct: 225 DGLRVVVANGDRIVSPGRCHNLPLLI---DGEIFRVDCFALDLCAV 267
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 4 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 123
L+ +L C ++N+ +LE+++ P +FE + +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793
>07_03_1346 +
25927043-25927333,25927867-25927929,25928005-25928093,
25928177-25928237,25928848-25929009,25929099-25929257,
25929351-25929427,25929515-25929654,25929752-25929783,
25929877-25929951,25930268-25930340,25930456-25930544,
25930781-25930933,25931023-25931127
Length = 522
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 361 VAPVPVNQ-LPEGYECDLDAVEELVRHRASQL 453
VA V V + LPEGY+ + AVEE R RA L
Sbjct: 31 VAAVGVGEELPEGYDQMMPAVEEARRRRAGVL 62
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETV-YGAVELTHLT 240
E+++ P + PE + P PP A +P T PT V A L T
Sbjct: 108 EEIEDPDGDSPFVDAPEHISPPPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPART 167
Query: 241 PPQSPPGP 264
P +P P
Sbjct: 168 PTPTPSAP 175
>03_02_0076 -
5451137-5452503,5453439-5453866,5453949-5454046,
5454723-5454836,5455017-5455111,5455222-5455283,
5455398-5455557,5456247-5456643
Length = 906
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +1
Query: 118 VDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV--ELTH----LTPPQSPPGPATQLL 279
VD PAA+L + F TS EELL +Y ++ L H ++ QS A+ ++
Sbjct: 292 VDAYQPAALLFCTSFETSYGVEELLNTLPRLYDSLLPSLLHGFQVMSSSQSNGETASDII 351
Query: 280 LS 285
LS
Sbjct: 352 LS 353
>01_06_0751 + 31690411-31690443,31692900-31694240
Length = 457
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 97 ISEVPERVD-PQPPAAVLASSPFVTSQPT 180
I E+P+R + P PPAA P T Q T
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQAT 223
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 91 ENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 222
+++SE+P PQPPA+V+AS QP + R + Y A+
Sbjct: 167 DSLSELPP--PPQPPASVVASLAARPPQPRQLQRRPQDGAYRAL 208
>04_03_0716 +
18995712-18995904,18996511-18996614,18997280-18997393,
18997819-18997824,18998041-18998097
Length = 157
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 424 PRRRPSHTRNLPAAG*PEQVPQSATLLA 341
PRRR H R G P Q PQ A L A
Sbjct: 35 PRRRSRHLRCCSGGGDPGQPPQEAVLEA 62
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 142 VLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGP 264
V+ S PF + ++L + + +E+ L PP PP P
Sbjct: 139 VIVSGPFDPDKLADKLCCKACKIIKEIEIVDLPPPPPPPAP 179
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 97 ISEVPERVDPQP---PAAVLAS-SPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGP 264
+S VP R P P PAA AS SP + P E +++ A + PP PP P
Sbjct: 263 VSSVP-RSSPSPAPAPAARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKP 321
Query: 265 A 267
A
Sbjct: 322 A 322
>09_04_0323 -
16679565-16679939,16680328-16680660,16680721-16681032,
16683590-16683825,16683972-16684239
Length = 507
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 103 EVPERVDPQPPAAVLASSP 159
E P + P PPAAVL SSP
Sbjct: 31 EEPVTLPPLPPAAVLGSSP 49
>05_06_0259 +
26733699-26733854,26733940-26734071,26734171-26734341,
26734419-26734445,26734550-26734757,26735160-26735241,
26735384-26735492,26735640-26735756,26735828-26736160
Length = 444
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 181 QWAARSQKDLKLEPLPGVVGPRVQELQKCFRRSKGG 74
+W ARS K K +P V P+ + ++C R S G
Sbjct: 141 EWWARSCKRKKTKPCSTVSAPKALQFEECRRVSVQG 176
>03_01_0108 +
857303-857372,857690-857730,857751-857783,857901-857996,
858435-858602,858683-858751,858844-858871,859019-859196,
859390-859570,859748-859824,860449-860560
Length = 350
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 374 RLTSCRKVTSVTWTPSRNWSVTEPLNWHLR 463
RL C V + + P+R+W+ T N HLR
Sbjct: 306 RLVCCVNVNELLFHPNRDWTATSSSN-HLR 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,857
Number of Sequences: 37544
Number of extensions: 272734
Number of successful extensions: 813
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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