Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C02f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p pro... 32 0.54
AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA ... 32 0.54
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 31 0.72
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 31 0.72
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 31 0.72
BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p pro... 31 0.95
AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular prot... 31 0.95
AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA ... 31 0.95
AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p pro... 30 2.2
AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA ... 30 2.2
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 2.9
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P... 29 2.9
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 2.9
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 2.9
AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p pro... 29 5.1
AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-P... 29 5.1
AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-P... 29 5.1
AY118612-1|AAM49981.1| 218|Drosophila melanogaster LP10549p pro... 28 8.8
AE013599-3064|AAF57428.1| 218|Drosophila melanogaster CG30152-P... 28 8.8
>AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p
protein.
Length = 247
Score = 31.9 bits (69), Expect = 0.54
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 416 PSRNWSVTEPLNWHLRNI 469
P RNW + E LNWH R +
Sbjct: 109 PERNWVIVEGLNWHYRKV 126
>AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA
protein.
Length = 247
Score = 31.9 bits (69), Expect = 0.54
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 416 PSRNWSVTEPLNWHLRNI 469
P RNW + E LNWH R +
Sbjct: 109 PERNWVIVEGLNWHYRKV 126
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 31 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 198
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 199 FETVYGAVELTHLTPPQS-PPGPATQL 276
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 31 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 198
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 199 FETVYGAVELTHLTPPQS-PPGPATQL 276
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 31 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 198
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 199 FETVYGAVELTHLTPPQS-PPGPATQL 276
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p
protein.
Length = 856
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 247 QSPPGPAT 270
PPGP T
Sbjct: 189 APPPGPPT 196
>AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular
protein.
Length = 856
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 247 QSPPGPAT 270
PPGP T
Sbjct: 189 APPPGPPT 196
>AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA
protein.
Length = 856
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 247 QSPPGPAT 270
PPGP T
Sbjct: 189 APPPGPPT 196
>AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p
protein.
Length = 595
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 462 RRCQLRGSVTDQFLDGVQVTLVTFRQLVNRNRCHNLPRFLRR 337
R + VTDQ +D + + ++ R +V +R +L F+RR
Sbjct: 308 RLLDIASGVTDQSVDAIAMVILALRCIVTDHRHRHLQHFVRR 349
>AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA
protein.
Length = 595
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 462 RRCQLRGSVTDQFLDGVQVTLVTFRQLVNRNRCHNLPRFLRR 337
R + VTDQ +D + + ++ R +V +R +L F+RR
Sbjct: 308 RLLDIASGVTDQSVDAIAMVILALRCIVTDHRHRHLQHFVRR 349
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 222
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
protein.
Length = 2072
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 364 APVPVNQLPEGYECDLDAVEELVRHRASQ 450
+P+PV Q+P+ Y ++ + EL + R S+
Sbjct: 1108 SPIPVPQVPKNYRYSIETLRELAKRRDSR 1136
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 222
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 67 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 222
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p
protein.
Length = 713
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 167 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 45
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-PB,
isoform B protein.
Length = 713
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 167 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 45
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-PA,
isoform A protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 167 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 45
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AY118612-1|AAM49981.1| 218|Drosophila melanogaster LP10549p
protein.
Length = 218
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 137 AGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 45
AGG GS+ SGT + I GRS + + K
Sbjct: 33 AGGTGSSESGTGSSSASISGRSQNADELVRK 63
>AE013599-3064|AAF57428.1| 218|Drosophila melanogaster CG30152-PA
protein.
Length = 218
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 137 AGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 45
AGG GS+ SGT + I GRS + + K
Sbjct: 33 AGGTGSSESGTGSSSASISGRSQNADELVRK 63
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.313 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,430,577
Number of Sequences: 53049
Number of extensions: 438100
Number of successful extensions: 1428
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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