Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311C02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 36 0.013
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 36 0.013
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 36 0.013
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.7
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.7
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 2.7
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 2.7
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.7
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.7
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.7
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.7
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 27 6.2
Z68011-2|CAA92013.2| 381|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 27 8.1
AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna hel... 27 8.1
AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein. 27 8.1
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 130 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 97 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 130 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 112 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 150
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 130 PPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 246
PP AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 97 PPMAVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 61 EEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETV---YGAVELT 231
+++ D+ I E+ ++ P PA ++ ++P ++ + +L+ ET+ G E+T
Sbjct: 3 DDEDDIVWIREDTAQSSVPTSPTTPATIIEAAPVLSDAFDKPILKSVETISVSNGPPEVT 62
Query: 232 HLTPPQSPP 258
PP +PP
Sbjct: 63 ISAPPPTPP 71
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 125 GSTRSGTSEMFSKIEGRSTFSSNQLEKIFSC 33
G T+ MF+ + GR TF+ + K+ SC
Sbjct: 257 GKITGPTAPMFNGVPGRETFNVDHTSKVLSC 287
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 64 EKVDLPSIFENISEVPERVDPQPPAAV 144
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 364 APVPVNQLPEGYECDLDAVEELVRHRASQLA 456
AP PV + P G ECD E + + LA
Sbjct: 109 APAPVEENPYGPECDAGKAPERISQTVASLA 139
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 7 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 129
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
>Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical
protein R11.3 protein.
Length = 528
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 196 PAAVLQWAARSQKDLKLEPLPGVVGPRVQELQ--KCFRRSKGGQLFPLTSWRK 44
PA L WA RSQ + + P V P V + Q K +R+ KG L W +
Sbjct: 405 PAMKLAWALRSQLESEQAP-AAVFDPMVVDKQQRKKYRKKKGTNLDYKMIWEE 456
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 7 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 129
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
>Z68011-2|CAA92013.2| 381|Caenorhabditis elegans Hypothetical
protein T21B6.2 protein.
Length = 381
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 46 FSNWLEEKVDLPSIFENISEV 108
F NW++EKV+ S+ + I+E+
Sbjct: 205 FPNWIDEKVNGKSLLDTIAEI 225
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +1
Query: 7 LQQLDSQCKQENIFSNWLEEKVDLPS 84
+Q++D+ C +NI + K+D+P+
Sbjct: 106 MQEVDTYCTNDNIIKMMVANKIDMPN 131
>AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna
helicase (yeast) homologprotein 1 protein.
Length = 677
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 LLQQLDSQCKQENIFSNWLEEKVDLPSIFEN-ISEVPERVDPQPPAAVLASSPFVTSQ 174
+ Q + ++ N+F L+ K+D+ + ++ IS VP + +PPA SP S+
Sbjct: 107 MFQMFNCAPRKLNVFMKSLQAKLDIMKMEKSPISAVPRQFS-RPPAVFSVLSPLTISE 163
>AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein.
Length = 677
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 LLQQLDSQCKQENIFSNWLEEKVDLPSIFEN-ISEVPERVDPQPPAAVLASSPFVTSQ 174
+ Q + ++ N+F L+ K+D+ + ++ IS VP + +PPA SP S+
Sbjct: 107 MFQMFNCAPRKLNVFMKSLQAKLDIMKMEKSPISAVPRQFS-RPPAVFSVLSPLTISE 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,575,305
Number of Sequences: 27780
Number of extensions: 206879
Number of successful extensions: 651
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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