Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311C02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              27   0.15 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 472  WNVAEMPVERLGDGPVPRRRPSHTRNLPAAG*PEQVPQSAT 350
            ++V      ++G GP+   R  HT    A G PEQ P   T
Sbjct: 1053 YSVVVQAFNKVGSGPMSEERRQHT----AEGVPEQPPHDTT 1089


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 422 RNWSVTEPLNW 454
           R W++T+P+N+
Sbjct: 134 RYWAITDPINY 144


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 422 RNWSVTEPLNW 454
           R W++T+P+N+
Sbjct: 134 RYWAITDPINY 144


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 422 RNWSVTEPLNW 454
           R W++T+P+N+
Sbjct: 134 RYWAITDPINY 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,734
Number of Sequences: 438
Number of extensions: 2311
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)