Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311C02f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77460.1 68414.m09020 C2 domain-containing protein / armadill...    33   0.12 
At1g10620.1 68414.m01204 protein kinase family protein contains ...    32   0.20 
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p...    29   1.4  
At4g35790.3 68417.m05086 phospholipase D delta / PLD delta (PLDD...    28   4.4  
At4g35790.2 68417.m05085 phospholipase D delta / PLD delta (PLDD...    28   4.4  
At4g35790.1 68417.m05084 phospholipase D delta / PLD delta (PLDD...    28   4.4  
At3g30670.1 68416.m03887 hypothetical protein                          27   5.8  
At1g40125.1 68414.m04763 hypothetical protein member of hypothet...    27   5.8  
At5g42950.1 68418.m05236 GYF domain-containing protein contains ...    27   7.7  
At5g28785.1 68418.m03539 hypothetical protein                          27   7.7  

>At1g77460.1 68414.m09020 C2 domain-containing protein /
            armadillo/beta-catenin repeat family protein similar to
            CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
            profiles PF00514: Armadillo/beta-catenin-like repeat,
            PF00168: C2 domain
          Length = 2110

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +1

Query: 37   ENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTS 171
            E I ++W +  +D   IFE +S+V  + DPQPP  +  S+ FV S
Sbjct: 1596 EKISASWPKAVLDAEGIFE-LSKVILQEDPQPPLDLWESAAFVLS 1639


>At1g10620.1 68414.m01204 protein kinase family protein contains
           serine/threonine protein kinases active-site signature,
           PROSITE:PS00108
          Length = 718

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 154 SPFVTSQPTEELLREFETVYGAVELTH--LTPPQSPPGPATQ 273
           SPFV SQPT       + + G  E T    T P SPP P TQ
Sbjct: 16  SPFVASQPTNVGGFTDQKIIGGSETTQPPATSPPSPPSPDTQ 57


>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
           protein weak similarity to SP|Q00765 Polyposis locus
           protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
           profile PF03134: TB2/DP1, HVA22 family
          Length = 315

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +1

Query: 100 SEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGP 264
           S+ P+ V  +P +    SSP    Q   E  +E +      +LT LTPP  PP P
Sbjct: 188 SKKPQLVTKEPISPKPLSSPRKQQQLQTET-KEAKASVSQTKLTTLTPPGPPPPP 241


>At4g35790.3 68417.m05086 phospholipase D delta / PLD delta
           (PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
           from [Arabidopsis thaliana]; supporting cDNA
           gi|11761141|dbj|AB031047.1|
          Length = 693

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -2

Query: 271 ESRVPADSAAVLNALTRQHHKPFRIPAAVLQWAARSQKDLKLEPLPGVVGPRVQELQKCF 92
           E++VP D    L  L +   +   +   +L W  ++  D      PGV+G   +E +K F
Sbjct: 271 ETKVPRDKDMTLGELLKYKSQE-GVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFF 329

Query: 91  RRS 83
           + S
Sbjct: 330 KHS 332


>At4g35790.2 68417.m05085 phospholipase D delta / PLD delta
           (PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
           from [Arabidopsis thaliana]; supporting cDNA
           gi|11761141|dbj|AB031047.1|
          Length = 857

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -2

Query: 271 ESRVPADSAAVLNALTRQHHKPFRIPAAVLQWAARSQKDLKLEPLPGVVGPRVQELQKCF 92
           E++VP D    L  L +   +   +   +L W  ++  D      PGV+G   +E +K F
Sbjct: 271 ETKVPRDKDMTLGELLKYKSQE-GVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFF 329

Query: 91  RRS 83
           + S
Sbjct: 330 KHS 332


>At4g35790.1 68417.m05084 phospholipase D delta / PLD delta
           (PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
           from [Arabidopsis thaliana]; supporting cDNA
           gi|11761141|dbj|AB031047.1|
          Length = 868

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -2

Query: 271 ESRVPADSAAVLNALTRQHHKPFRIPAAVLQWAARSQKDLKLEPLPGVVGPRVQELQKCF 92
           E++VP D    L  L +   +   +   +L W  ++  D      PGV+G   +E +K F
Sbjct: 271 ETKVPRDKDMTLGELLKYKSQE-GVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFF 329

Query: 91  RRS 83
           + S
Sbjct: 330 KHS 332


>At3g30670.1 68416.m03887 hypothetical protein
          Length = 133

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  IFENISEVPERVDPQPPAAVLASSPFVTSQP 177
           +F++ +  P+RVDP PP       P ++  P
Sbjct: 79  LFQHSTNQPQRVDPLPPQETAQQDPPLSPDP 109


>At1g40125.1 68414.m04763 hypothetical protein member of
           hypothetical protein common family
          Length = 168

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  IFENISEVPERVDPQPPAAVLASSPFVTSQP 177
           +F++ +  P+RVDP PP       P ++  P
Sbjct: 78  LFQHSTNQPQRVDPLPPQETAQQDPPLSPDP 108


>At5g42950.1 68418.m05236 GYF domain-containing protein contains Pfam
            profile: PF02213 GYF domain
          Length = 1714

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +1

Query: 79   PSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPP 258
            PS+ + +    E V+  PPAA  +S P  +++P+   LR+   V    ++T  + P   P
Sbjct: 1395 PSLGDFVLWKGESVNNPPPAAAWSSGPKKSTKPSS--LRDI--VKEQEKMTTSSHPPPSP 1450

Query: 259  GPATQ 273
             P TQ
Sbjct: 1451 VPTTQ 1455


>At5g28785.1 68418.m03539 hypothetical protein
          Length = 187

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 155 LEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEKIFSCLH 27
           LEA +A  G    R    E+  K+       +NQ EKI SC H
Sbjct: 68  LEASSAHIGPSVPREDPGELSQKLAAAEALIANQAEKI-SCFH 109


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.313    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,955,816
Number of Sequences: 28952
Number of extensions: 193019
Number of successful extensions: 490
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)