Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311B08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 129 1e-30
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 106 1e-23
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 100 1e-21
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 85 3e-17
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 83 9e-17
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 60 9e-10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 57 9e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 55 4e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 55 4e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 54 5e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 54 5e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 8e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 8e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 8e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 52 2e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 52 2e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 52 2e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 50 8e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 48 3e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 46 2e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 45 3e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 45 3e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 44 5e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 44 5e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 44 5e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 44 5e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 44 9e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 43 2e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 43 2e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 5e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.001
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 38 0.006
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 38 0.006
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.023
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 33 0.094
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 33 0.094
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 33 0.094
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.66
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.66
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.66
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 1.5
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 1.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 29 2.0
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 29 2.0
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 29 2.7
Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z75541-5|CAE17852.1| 291|Caenorhabditis elegans Hypothetical pr... 27 6.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 129 bits (311), Expect = 1e-30
Identities = 63/134 (47%), Positives = 84/134 (62%)
Frame = +3
Query: 120 NDQPGGNLRKIHWDTVTLTPFQKNFYVPHPNVQRRTQSEIEAYRSQHQITVKGRDVPAPS 299
N GG LR + W LTP +K+FY + V RR Q EI+ + S +Q+T++GR VP P
Sbjct: 70 NGSAGGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPV 129
Query: 300 IFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
F E P + E+L F PT IQ+ WPIA+SGRD++ IA+TGSGKTLA++LPA+
Sbjct: 130 FEFNEAPLPGQ-IHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPAL 188
Query: 480 VHIINQPRLLRDDG 521
VHI Q R +G
Sbjct: 189 VHITKQAHRQRGEG 202
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 106 bits (254), Expect = 1e-23
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = +3
Query: 180 FQKNFYVPHPNVQRRTQSEIEAYRSQ-HQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQ 356
F+KNFY+ ++R T++E++AYR + ITVKG D P P + + G M + K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 357 GFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDDG 521
+ PT IQAQ P +SGRD++GIA+TGSGKTLA++LP HI++QP L DG
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG 377
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 99.5 bits (237), Expect = 1e-21
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = +3
Query: 180 FQKNFYVPHPNVQRRTQSEIEAYRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQG 359
F KNFY H +++R ++ ++ + V G P P F F M+ I K
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 360 FPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDDG 521
+ PTPIQA P ALSGRD++GIA+TGSGKT AY+ PAIVHI++QP L +G
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEG 338
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 89.8 bits (213), Expect = 1e-18
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +3
Query: 246 YRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMV 425
+R I++KG VP P +EE GFPD + + + G+ PTPIQ Q PI L RD++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 426 GIAQTGSGKTLAYILPAIVHIINQPRLLRDD 518
G+A+TGSGKT A++LP +V I + P++ R +
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQE 373
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 85.0 bits (201), Expect = 3e-17
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +3
Query: 201 PHPNVQRRTQSEIEAYRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQ-GFPNPTP 377
P +++R++Q + E R + I+ +G +P P F E FP ++ + KQ G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 378 IQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQ 497
IQ QG P+ALSGRDM+GIA TGSGKT+ ++LP ++ + Q
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQ 255
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 83.4 bits (197), Expect = 9e-17
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 237 IEAYRSQHQITVKGRDVPAPSIFFEEG-GFPDYAMKEILKQGFPNPTPIQAQGWPIALSG 413
++ Y + + TVK +P P FE+ G M EI K GF P+PIQ+Q WP+ LSG
Sbjct: 65 MKVYPFREESTVK---IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG 121
Query: 414 RDMVGIAQTGSGKTLAYILPAIVHI 488
+D +G++QTGSGKTLA++LPA++HI
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHI 146
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 NVQRRTQSEIEAYRSQH-QITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQA 386
N+ RT S I + ++ + V G VPA F E GF M+ + + G+ PTP+Q
Sbjct: 108 NLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQK 167
Query: 387 QGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHII 491
P L+ RD++ AQTGSGKT A++LP I HI+
Sbjct: 168 HSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL 202
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 NVQRRTQSEIEAYRSQH-QITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQA 386
N+ RT S I + ++ + V G VPA F E GF M+ + + G+ PTP+Q
Sbjct: 92 NLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQK 151
Query: 387 QGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHII 491
P L+ RD++ AQTGSGKT A++LP I HI+
Sbjct: 152 HSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL 186
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 NVQRRTQSEIEAYRSQH-QITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQA 386
N+ RT S I + ++ + V G VPA F E GF M+ + + G+ PTP+Q
Sbjct: 89 NLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQK 148
Query: 387 QGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHII 491
P L+ RD++ AQTGSGKT A++LP I HI+
Sbjct: 149 HSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL 183
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 60.1 bits (139), Expect = 9e-10
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 264 ITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTG 443
+ G DVP P F + ++ + I G+ PTP+Q P GRD++ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 444 SGKTLAYILPAIVHII 491
SGKT A+++P + I+
Sbjct: 214 SGKTAAFLVPLVNAIL 229
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +3
Query: 297 SIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPA 476
++ FE+ +K G+ +PTPIQ P+AL+G+D+ A TG+GKT A++LP
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 477 IVHIINQPR 503
+ +I +P+
Sbjct: 207 LERMIYRPK 215
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 QITVKGRDVPA-PSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQ 437
Q+ +G+ V P F + P + + + G+ TPIQ P+ G+D++ AQ
Sbjct: 284 QLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
Query: 438 TGSGKTLAYILPAIVHII 491
TGSGKT A++LP + +I
Sbjct: 344 TGSGKTAAFLLPIMSRLI 361
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 QITVKGRDVPA-PSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQ 437
Q+ +G+ V P F + P + + + G+ TPIQ P+ G+D++ AQ
Sbjct: 284 QLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
Query: 438 TGSGKTLAYILPAIVHII 491
TGSGKT A++LP + +I
Sbjct: 344 TGSGKTAAFLLPIMSRLI 361
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
+++ G K I K+GF PTPIQ + P + G+D+V +++TGSGKT A+++P +
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
+++ G K I K+GF PTPIQ + P + G+D+V +++TGSGKT A+++P +
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPML 83
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +3
Query: 210 NVQRRTQSEIEAYRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQ 389
+V++R Q ++ R ++I G +P + F + + + + P+PIQ Q
Sbjct: 96 DVEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQ 155
Query: 390 GWPIALSGRDMVGIAQTGSGKTLAYILPAIVHII 491
P R+++ A TGSGKTLA+ LP I I+
Sbjct: 156 SIPFMTERRNVLASAPTGSGKTLAFALPVIDEIL 189
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 294 PSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILP 473
P F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 474 AIVHIINQPRL 506
+ +I+ L
Sbjct: 399 IMTRLIDDNNL 409
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 294 PSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILP 473
P F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 474 AIVHIINQPRL 506
+ +I+ L
Sbjct: 399 IMTRLIDDNNL 409
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 294 PSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILP 473
P F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 474 AIVHIINQPRL 506
+ +I+ L
Sbjct: 399 IMTRLIDDNNL 409
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 486 IINQ 497
+I++
Sbjct: 614 LIDE 617
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 486 IINQ 497
+I++
Sbjct: 614 LIDE 617
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F E + K + G+ TPIQ P+ G D++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 486 IINQ 497
+I++
Sbjct: 614 LIDE 617
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 50.4 bits (115), Expect = 8e-07
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 357 GFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPR 503
G+ P+ IQ P AL G+D++G+A+TGSGKT A+ +P + +++ P+
Sbjct: 63 GWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ 111
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 324 PDYAMKEILKQGFPNPTPIQAQGWPIALSGR-DMVGIAQTGSGKTLAYILPAIVHII 491
P+ ++ I + GF PT IQ+ P A+ R D++G A+TGSGKTLA+ +P + ++
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 219
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 312 EGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI--VH 485
EG +K + GF T IQA+ L G+D++ A+TGSGKTLA++LPAI +H
Sbjct: 72 EGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLH 131
Query: 486 IIN 494
+N
Sbjct: 132 KLN 134
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 345 ILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRL 506
I ++G+ P+PIQ +AL+G+D++ A+ G+GKT AY +P I I QP L
Sbjct: 58 IFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPAL 109
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 369 PTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRD 515
PTPIQ + + G D+V A TGSGKTLA+++P ++ ++ + RD
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRD 807
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 369 PTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRD 515
PTPIQ + + G D+V A TGSGKTLA+++P ++ ++ + RD
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRD 807
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 336 MKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHI 488
++ + F P+P+QA+ P+ L GRDM+ A++G+GKTL + + A+ ++
Sbjct: 34 LERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENL 84
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 336 MKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHI 488
++ + F P+P+QA+ P+ L GRDM+ A++G+GKTL + + A+ ++
Sbjct: 34 LERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENL 84
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F + G + +++ TP+QA P L G D++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 486 IINQP 500
+ P
Sbjct: 151 LSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F + G + +++ TP+QA P L G D++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 486 IINQP 500
+ P
Sbjct: 151 LSVDP 155
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 360 FPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
+ PT IQ +L+G D+VG A+TGSGKTLA ++P +
Sbjct: 96 YTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F++ G + ++ I GF P+ IQ + P L RD++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 486 IINQPR 503
+ Q R
Sbjct: 88 LDTQVR 93
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F++ G + ++ I GF P+ IQ + P L RD++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 486 IINQPR 503
+ Q R
Sbjct: 88 LDTQVR 93
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 360 FPNPTPIQAQGWPIALSGR-DMVGIAQTGSGKTLAYILPAIVHII 491
F PT IQ+ P A+ R D++G A+TGSGKTLA+ +P + ++
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 52
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F + G + +K I + G+ +Q +AL ++++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 486 IINQPR 503
+I + +
Sbjct: 151 LIAESK 156
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
FEE G + + PT +Q++ P L G D + A+TGSGKT A+ LP I
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP-IAQ 62
Query: 486 IINQPR 503
I+ + R
Sbjct: 63 IVWERR 68
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 37.5 bits (83), Expect = 0.006
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +3
Query: 219 RRTQSEIEAYRS--QHQITVK-GRDVPAPSIFFEEGGFP--DYAMKEILKQGF--PNPTP 377
RR +SE+ R + +I +K D + ++ GFP D A K ILK+ F P
Sbjct: 31 RRKKSELTQKRQAIERKIELKTNEDSDVVTDRWDRDGFPWSDEATK-ILKEQFHLEKFRP 89
Query: 378 IQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIV 482
+Q +S D V I TG GK+L Y LPA++
Sbjct: 90 LQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.006
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +3
Query: 219 RRTQSEIEAYRS--QHQITVK-GRDVPAPSIFFEEGGFP--DYAMKEILKQGF--PNPTP 377
RR +SE+ R + +I +K D + ++ GFP D A K ILK+ F P
Sbjct: 54 RRKKSELTQKRQAIERKIELKTNEDSDVVTDRWDRDGFPWSDEATK-ILKEQFHLEKFRP 112
Query: 378 IQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIV 482
+Q +S D V I TG GK+L Y LPA++
Sbjct: 113 LQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 EILKQ-GFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRD 515
E LK+ + N IQ P L G D++G A+T +GKT A+ LP I I+ R+
Sbjct: 394 ETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRN 452
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.7 bits (76), Expect = 0.041
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 396 PIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQP 500
P L RD+ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 342 EILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIIN 494
E+ + + + T +Q L+ D+V + TGSGKTLA++LP + I N
Sbjct: 23 EVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQN 73
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F++ + ++ I GF P+ IQ + +G+D++ AQ+G+GKT + + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 486 I 488
I
Sbjct: 91 I 91
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH 485
F++ + ++ I GF P+ IQ + +G+D++ AQ+G+GKT + + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 486 I 488
I
Sbjct: 91 I 91
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSG--RDMVGIAQTGSGKTLAYILPAI 479
F E +K + F PT IQ P+ L +++ AQ+G+GKT A++L +
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 480 VHI 488
I
Sbjct: 271 CRI 273
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSG--RDMVGIAQTGSGKTLAYILPAI 479
F E +K + F PT IQ P+ L +++ AQ+G+GKT A++L +
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 480 VHI 488
I
Sbjct: 296 CRI 298
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 306 FEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSG--RDMVGIAQTGSGKTLAYILPAI 479
F E +K + F PT IQ P+ L +++ AQ+G+GKT A++L +
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 480 VHI 488
I
Sbjct: 680 CRI 682
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 402 ALSGRDMVGIAQTGSGKTLAYILPAIVHI 488
AL G++ V +A TGSGKT I A+ HI
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHI 410
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 378 IQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
+Q + GR +V A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 378 IQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAI 479
+Q + GR +V A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 405 LSGRDMVGIAQTGSGKTLAYILPAIV 482
L G D + TG+GK+L Y LPA++
Sbjct: 260 LMGHDTFVLMPTGAGKSLCYQLPAVI 285
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 405 LSGRDMVGIAQTGSGKTLAYILPAIV 482
L G D + TG+GK+L Y LPA++
Sbjct: 260 LMGHDTFVLMPTGAGKSLCYQLPAVI 285
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 438 TGSGKTLAYILPAIVH 485
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 260 MLATIGLNFALSSTLNIRMRDIEIFLEWCERYGVPVNF 147
++ + +NF I ++ + +F+E RYG+PVNF
Sbjct: 281 LIRWLKINFGEIFAAYIHIKALRVFVESVLRYGLPVNF 318
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 260 MLATIGLNFALSSTLNIRMRDIEIFLEWCERYGVPVNF 147
++ + +NF I ++ + +F+E RYG+PVNF
Sbjct: 281 LIRWLKINFGEIFAAYIHIKALRVFVESVLRYGLPVNF 318
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 357 GFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYIL 470
GF P+ IQ +G+D+ +Q GSGKT+ ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLI 52
>Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical
protein K01B6.3 protein.
Length = 410
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 263 LMLATIGLNFALSSTLNIRMRDIEIFLEWCERYGVPVNFSKVTA 132
L++ I FAL L + M IFL WCE Y P+ +TA
Sbjct: 83 LLVCIIESTFALICFLAV-MLHYAIFLPWCEVYSKPLMVFFLTA 125
>Z75541-5|CAE17852.1| 291|Caenorhabditis elegans Hypothetical
protein F52B5.7 protein.
Length = 291
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 161 HRNAHTIPEKFLCPSSECSTSNSKRN 238
H HT ++++CP C T N R+
Sbjct: 193 HAIIHTSLQRYICPVKNCGTKNRHRS 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,497,615
Number of Sequences: 27780
Number of extensions: 260370
Number of successful extensions: 764
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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