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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311B07f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g30845.1 68414.m03772 expressed protein                             30   1.1  
At5g42800.1 68418.m05213 dihydroflavonol 4-reductase (dihydrokae...    27   7.7  
At5g35190.1 68418.m04170 proline-rich extensin-like family prote...    27   7.7  

>At1g30845.1 68414.m03772 expressed protein
          Length = 124

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 110 VFDYGKYIICNIILWYCILTVV*KTLSNL 196
           V  YG  +ICN+++W C +  + + LS+L
Sbjct: 35  VIKYGLVVICNVVMWACYVNSL-RALSSL 62


>At5g42800.1 68418.m05213 dihydroflavonol 4-reductase
           (dihydrokaempferol 4-reductase) (DFR) nearly identical
           to GI:166686
          Length = 382

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 431 YALEEVFIERAEDVRSNTFPPAAL 502
           Y+LEE+FIE  E  R   F P +L
Sbjct: 306 YSLEEMFIESIETCRQKGFLPVSL 329


>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
           contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 328

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 17  PPPNYIQITIVSYKSQPAVPTRGPGTALS 103
           PPP Y     VSYKS P  P   P   +S
Sbjct: 259 PPPYYSPSPEVSYKSPPPPPYYSPSLEVS 287


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,598,146
Number of Sequences: 28952
Number of extensions: 164728
Number of successful extensions: 545
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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