BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS311B07f (521 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g30845.1 68414.m03772 expressed protein 30 1.1 At5g42800.1 68418.m05213 dihydroflavonol 4-reductase (dihydrokae... 27 7.7 At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 27 7.7 >At1g30845.1 68414.m03772 expressed protein Length = 124 Score = 29.9 bits (64), Expect = 1.1 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 110 VFDYGKYIICNIILWYCILTVV*KTLSNL 196 V YG +ICN+++W C + + + LS+L Sbjct: 35 VIKYGLVVICNVVMWACYVNSL-RALSSL 62 >At5g42800.1 68418.m05213 dihydroflavonol 4-reductase (dihydrokaempferol 4-reductase) (DFR) nearly identical to GI:166686 Length = 382 Score = 27.1 bits (57), Expect = 7.7 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 431 YALEEVFIERAEDVRSNTFPPAAL 502 Y+LEE+FIE E R F P +L Sbjct: 306 YSLEEMFIESIETCRQKGFLPVSL 329 >At5g35190.1 68418.m04170 proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 328 Score = 27.1 bits (57), Expect = 7.7 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +2 Query: 17 PPPNYIQITIVSYKSQPAVPTRGPGTALS 103 PPP Y VSYKS P P P +S Sbjct: 259 PPPYYSPSPEVSYKSPPPPPYYSPSLEVS 287 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,598,146 Number of Sequences: 28952 Number of extensions: 164728 Number of successful extensions: 545 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 544 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 957410176 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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