Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311B04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126761-1|BAC86677.1|  134|Homo sapiens protein ( Homo sapiens ...    30   4.3  
AK027436-1|BAB55108.1|  358|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>AK126761-1|BAC86677.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44808 fis, clone BRACE3044090. ).
          Length = 134

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 171 GQRPASAQLVQQHGGAPHRQRPRGLLL 251
           G  PASA       G  HR RPRGLLL
Sbjct: 87  GDLPASASQSAGIAGVSHRARPRGLLL 113


>AK027436-1|BAB55108.1|  358|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14530 fis, clone NT2RM2000101. ).
          Length = 358

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 465 ITLQRILIMWLQERVPERG*ELGQARGWSGAGTLN 361
           +T QR+L+    + VP+R   LG  R  +G GT++
Sbjct: 307 LTQQRLLVSNANQTVPDRSDRLGTDRSVAGGGTVS 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,359,842
Number of Sequences: 237096
Number of extensions: 871723
Number of successful extensions: 2488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)