SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311B02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASS 224
           SR +  +  D CPE+ G  A +
Sbjct: 28  SRDEEYEATDQCPEKYGFFADA 49


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 487  EANCLKTVSIFYVSI*SL 434
            E NCLK   I+YV++ S+
Sbjct: 998  EFNCLKYGVIYYVTVPSM 1015


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 487  EANCLKTVSIFYVSI*SL 434
            E NCLK   I+YV++ S+
Sbjct: 998  EFNCLKYGVIYYVTVPSM 1015


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 364 NESLTRLVQTPLALMDISLIVNTLSSK 444
           NESLTRL +     + + L  +TL+ K
Sbjct: 404 NESLTRLYKKAGKEIPVILWTSTLTQK 430


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 236 STKRIAFTLQAYVRLKA 286
           +T+R+AF   AY  +KA
Sbjct: 129 TTRRLAFVNSAYTLVKA 145


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 193 ALKKLASWLPAIPSFYKTY 249
           A+ K   +LPA+P +   Y
Sbjct: 386 AVSKARQFLPALPGYVPVY 404


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 193 ALKKLASWLPAIPSFYKTY 249
           A+ K   +LPA+P +   Y
Sbjct: 211 AVSKARQFLPALPGYVPVY 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,393
Number of Sequences: 336
Number of extensions: 2234
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -