Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311B02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y15793-1|CAA75785.1| 1500|Homo sapiens carbamoyl phosphate synth...    29   9.9  
AY167007-1|AAO31763.1| 1500|Homo sapiens carbamoylphosphate synt...    29   9.9  
AF536523-1|AAN77181.1| 1500|Homo sapiens carbamylphosphate synth...    29   9.9  
AF154830-1|AAD38072.1| 1500|Homo sapiens carbamyl phosphate synt...    29   9.9  
AC008172-1|AAY14960.1| 1500|Homo sapiens unknown protein.              29   9.9  
AB208800-1|BAD92037.1| 1510|Homo sapiens carbamoyl-phosphate syn...    29   9.9  
AB180938-1|BAD74209.1| 1500|Homo sapiens carbamoylphosphate synt...    29   9.9  
AB180937-1|BAD74208.1|  932|Homo sapiens carbamoylphosphate synt...    29   9.9  
AB180936-1|BAD74207.1| 1500|Homo sapiens carbamoylphosphate synt...    29   9.9  
AB180935-1|BAD74206.1| 1261|Homo sapiens carbamoylphosphate synt...    29   9.9  
AB180934-1|BAD74205.1| 1500|Homo sapiens carbamoylphosphate synt...    29   9.9  
AB180933-1|BAD74204.1|  513|Homo sapiens carbamoylphosphate synt...    29   9.9  

>Y15793-1|CAA75785.1| 1500|Homo sapiens carbamoyl phosphate
           synthetase 1 protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AY167007-1|AAO31763.1| 1500|Homo sapiens carbamoylphosphate
           synthetase protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AF536523-1|AAN77181.1| 1500|Homo sapiens carbamylphosphate
           synthetase 1 protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AF154830-1|AAD38072.1| 1500|Homo sapiens carbamyl phosphate
           synthetase I protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AC008172-1|AAY14960.1| 1500|Homo sapiens unknown protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB208800-1|BAD92037.1| 1510|Homo sapiens carbamoyl-phosphate
           synthetase 1 variant protein.
          Length = 1510

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 325 NRGQNQPVLNITNKQAFITAQNHGYALDNALPAGWKPLF 363


>AB180938-1|BAD74209.1| 1500|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB180937-1|BAD74208.1|  932|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 932

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB180936-1|BAD74207.1| 1500|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB180935-1|BAD74206.1| 1261|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 1261

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB180934-1|BAD74205.1| 1500|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 1500

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


>AB180933-1|BAD74204.1|  513|Homo sapiens carbamoylphosphate
           synthetase I protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 159 SRGQGVKVLDSCPEEAGLLASSNPFILQNVLRSHYKPMF 275
           +RGQ   VL+   ++A + A ++ + L N L + +KP+F
Sbjct: 315 NRGQNQPVLNITNKQAFITAQNHGYALDNTLPAGWKPLF 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,335,894
Number of Sequences: 237096
Number of extensions: 1294848
Number of successful extensions: 2181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2181
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)