Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311B02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p pro...    31   1.3  
AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA...    31   1.3  
U36477-1|AAA91035.1|  664|Drosophila melanogaster neuron specifi...    28   8.8  
BT025207-1|ABF17898.1|  653|Drosophila melanogaster FI01106p pro...    28   8.8  
AE014296-729|AAF47819.1|  653|Drosophila melanogaster CG1130-PA ...    28   8.8  

>AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p
           protein.
          Length = 918

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 63  VRPIMSQAHYKEVQSCLKKKLHIRCLKVPQKLSRGQ 170
           VR I  QA Y+EV+   K    +R L++P+K + G+
Sbjct: 789 VRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGE 824


>AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA
           protein.
          Length = 918

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 63  VRPIMSQAHYKEVQSCLKKKLHIRCLKVPQKLSRGQ 170
           VR I  QA Y+EV+   K    +R L++P+K + G+
Sbjct: 789 VRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGE 824


>U36477-1|AAA91035.1|  664|Drosophila melanogaster neuron specific
           zinc finger transcriptionfactor protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  VQSCLKKKLHIRCLKVPQKLSRGQGVKVLDSCPEEAGLLASSNP 230
           ++S L K L   CLK  ++L     + + DS  E    +ASS P
Sbjct: 589 LKSYLNKHLESACLKDEEELMMSMSLSMHDSNSESGASMASSPP 632


>BT025207-1|ABF17898.1|  653|Drosophila melanogaster FI01106p
           protein.
          Length = 653

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  VQSCLKKKLHIRCLKVPQKLSRGQGVKVLDSCPEEAGLLASSNP 230
           ++S L K L   CLK  ++L     + + DS  E    +ASS P
Sbjct: 591 LKSYLNKHLESACLKDEEELMMSMSLSMHDSNSESGASMASSPP 634


>AE014296-729|AAF47819.1|  653|Drosophila melanogaster CG1130-PA
           protein.
          Length = 653

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  VQSCLKKKLHIRCLKVPQKLSRGQGVKVLDSCPEEAGLLASSNP 230
           ++S L K L   CLK  ++L     + + DS  E    +ASS P
Sbjct: 591 LKSYLNKHLESACLKDEEELMMSMSLSMHDSNSESGASMASSPP 634


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,606,227
Number of Sequences: 53049
Number of extensions: 385663
Number of successful extensions: 843
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)