Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311A12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   2.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.2  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 151 YNPLIWNNIFISDPVDRMV 207
           YN ++WN+I     VDR++
Sbjct: 106 YNAIVWNDIRTDKTVDRVL 124


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -3

Query: 165 NQWIVLLILNTCQTTRKIGTELWIFI---FKTHLITLMDLY 52
           N W VLL +  C   R +G  +   +   F+ H +T +D +
Sbjct: 556 NTWFVLLTIIFCSVYRILGVLILSALANRFRIHKLTKVDQF 596


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = +1

Query: 205 VNSRRRPKHVNT----DPPDPLTVLLGTTSTGH 291
           V +  + +H+NT    D P P T+L    S+G+
Sbjct: 517 VMTAAKVQHMNTSSMNDSPSPTTILTSVNSSGN 549


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -1

Query: 458 GLKPDDVATTNPSKSRASQNLPPDRKRDSLR--RSG 357
           G+K DD+     +   + + +PP R+    R  RSG
Sbjct: 230 GIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSG 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,820
Number of Sequences: 2352
Number of extensions: 10153
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)