Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311A12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM082552-1|CAL06698.1|  100|Homo sapiens immunoglobulin heavy ch...    29   7.5  
AM081928-1|CAL06074.1|  101|Homo sapiens immunoglobulin heavy ch...    29   7.5  
AM079453-1|CAL03599.1|  101|Homo sapiens immunoglobulin heavy ch...    29   7.5  
AY254099-1|AAP80572.1| 2030|Homo sapiens DOCK3 protein.                29   9.9  
AY145303-1|AAN12301.1| 2030|Homo sapiens modifier of cell adhesi...    29   9.9  
AM081472-1|CAL05618.1|  100|Homo sapiens immunoglobulin heavy ch...    29   9.9  
AB002297-1|BAA20759.1| 1907|Homo sapiens KIAA0299 protein.             29   9.9  

>AM082552-1|CAL06698.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 266 STVNGSGGSVLTCLGRRRLFTIRSTGSDMNILFQINGL 153
           ST++GSGGS       R  FTI    S+  +  Q+N L
Sbjct: 52  STISGSGGSTYYADSVRGRFTISRDNSNNTLYLQLNSL 89


>AM081928-1|CAL06074.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 266 STVNGSGGSVLTCLGRRRLFTIRSTGSDMNILFQINGL 153
           S +NGSGGS       R  FTI S  S   +  Q+N L
Sbjct: 52  SGINGSGGSTYYADSVRGRFTISSDNSKNTLYLQMNSL 89


>AM079453-1|CAL03599.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 266 STVNGSGGSVLTCLGRRRLFTIRSTGSDMNILFQINGL 153
           ST++GSGGS    +  +  FTI    S   +  Q+N L
Sbjct: 52  STISGSGGSTYYAVSLKGRFTISRDNSKNTLYLQMNSL 89


>AY254099-1|AAP80572.1| 2030|Homo sapiens DOCK3 protein.
          Length = 2030

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 154  CTTHFKHLPNNTKNRDRIMDFYI 86
            C THF+HL +N +++D + +F +
Sbjct: 956  CDTHFQHLLDNFQSKDELKEFLL 978


>AY145303-1|AAN12301.1| 2030|Homo sapiens modifier of cell adhesion
            protein.
          Length = 2030

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 154  CTTHFKHLPNNTKNRDRIMDFYI 86
            C THF+HL +N +++D + +F +
Sbjct: 956  CDTHFQHLLDNFQSKDELKEFLL 978


>AM081472-1|CAL05618.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 266 STVNGSGGSV-LTCLGRRRLFTIRSTGSDMNILFQINGL 153
           S+++G+GGS+  T  G+ R FTI    S   +L QIN L
Sbjct: 52  SSISGTGGSISYTDSGKGR-FTISRDNSKNTVLLQINSL 89


>AB002297-1|BAA20759.1| 1907|Homo sapiens KIAA0299 protein.
          Length = 1907

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 154 CTTHFKHLPNNTKNRDRIMDFYI 86
           C THF+HL +N +++D + +F +
Sbjct: 833 CDTHFQHLLDNFQSKDELKEFLL 855


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,680,491
Number of Sequences: 237096
Number of extensions: 1463530
Number of successful extensions: 8015
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8015
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)