Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311A10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   8.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 439 CLFLVFIITDC 407
           CLFL+F+  DC
Sbjct: 292 CLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 439 CLFLVFIITDC 407
           CLFL+F+  DC
Sbjct: 292 CLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 439 CLFLVFIITDC 407
           CLFL+F+  DC
Sbjct: 292 CLFLLFVFCDC 302


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 252 HTSFERQDSHQFT 214
           H ++ERQ  H FT
Sbjct: 837 HGAWERQTGHNFT 849


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 269 LRNFAYIQVSNDKIHINLLRKIHEFVEKSSFCCFL*ARRF 150
           L+NF   +    K  + +L  + E + KS F      +RF
Sbjct: 31  LKNFRLCKKHKTKKPVQILALLQEIIPKSYFGTTTNLKRF 70


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 269 LRNFAYIQVSNDKIHINLLRKIHEFVEKSSFCCFL*ARRF 150
           L+NF   +    K  + +L  + E + KS F      +RF
Sbjct: 31  LKNFRLCKKHKTKKPVQILALLQEIIPKSYFGTTTNLKRF 70


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 71   YYKPVSRNDSS 103
            YYKPVS +D +
Sbjct: 1237 YYKPVSTDDKT 1247


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 136 LAARTTAKACLRTIIPRNRLVIVLFYLSSDLAFLMITDTE 17
           LAA +        +  R+R+   LFY +  +A L   DT+
Sbjct: 99  LAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQ 138


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 146 PLPTCSPHY 120
           P+P  SPHY
Sbjct: 409 PIPNVSPHY 417


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 433 FLVFIITDCKFSYLHSY 383
           FL F++T+  F   H+Y
Sbjct: 111 FLPFVVTNIIFVLFHTY 127


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 251 CMQNFSKMSLCNSTFYRTSN 310
           C Q FS  + CN + Y +++
Sbjct: 138 CHQGFSSSTWCNYSAYSSAS 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,101
Number of Sequences: 336
Number of extensions: 2317
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)