Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311A10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.9  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.7  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 160  HEDFCPCRLAARTTAKACLRTIIPRNRLVIVL 65
            H D  PC L A T A   L  +    R++IVL
Sbjct: 1101 HRDL-PCVLRASTPAPVVLEAVHASRRVLIVL 1131


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 330 SEANDQILEVR*KVELHNDIFEKFCIHTSFER 235
           S+A  QIL     VELHN     F I++  ER
Sbjct: 455 SDALKQILSAAYNVELHNS--SPFSIYSFLER 484


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 330 SEANDQILEVR*KVELHNDIFEKFCIHTSFER 235
           S+A  QIL     VELHN     F I++  ER
Sbjct: 493 SDALKQILSAAYNVELHNS--SPFSIYSFLER 522


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 423 LLSRIANFLICIATLIGCLRDQNAELIHSRNS 328
           LLS  A+ +I  AT     +D    ++H +NS
Sbjct: 245 LLSISASCVIAFATSALVSKDSKFNMVHIQNS 276


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 72  ITSLFRGMIVLKQAFAVVRAA 134
           IT L+RG  V  Q   + RAA
Sbjct: 172 ITGLYRGFGVSVQGIIIYRAA 192


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 72  ITSLFRGMIVLKQAFAVVRAA 134
           IT L+RG  V  Q   + RAA
Sbjct: 172 ITGLYRGFGVSVQGIIIYRAA 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,282
Number of Sequences: 438
Number of extensions: 2426
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)